Factsheet for TraesCSU01G152500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT5G54160.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G407500.1	Wheat	cytosol	87.5	98.13
TraesCSU01G001300.1	Wheat	cytosol	30.28	97.32
TraesCS5D01G528600.1	Wheat	cytosol	94.44	94.18
TraesCSU01G183500.1	Wheat	cytosol	22.22	71.43
TraesCSU01G024300.1	Wheat	cytosol	68.89	69.47
TraesCSU01G013300.1	Wheat	cytosol	65.28	65.83
HORVU1Hr1G089620.1	Barley	cytosol	64.44	61.87
KRH64289	Soybean	cytosol	52.22	56.46
KRH53638	Soybean	mitochondrion	56.11	55.34
KRH64288	Soybean	cytosol, nucleus	56.11	55.34
KRH53640	Soybean	cytosol	55.83	55.07
KRH53639	Soybean	cytosol	55.28	54.37
Solyc03g080180.2.1	Tomato	extracellular	53.89	54.34
AT5G54160.1	Thale cress	cytosol	54.72	54.27
PGSC0003DMT400001512	Potato	cytosol	54.44	53.99
CDY18304	Canola	cytosol	30.83	53.88
CDY18302	Canola	cytosol	30.83	53.88
CDY18306	Canola	cytosol	54.44	53.85
CDY43839	Canola	cytosol	54.17	53.57
CDY14328	Canola	cytosol	54.17	53.57
Bra003007.1-P	Field mustard	cytosol	54.17	53.57
CDY43052	Canola	cytosol	53.89	53.3
Bra029041.1-P	Field mustard	cytosol	53.89	53.3
CDY55338	Canola	cytosol	43.33	52.7
Bra026320.1-P	Field mustard	cytosol	43.33	52.7
CDY14330	Canola	cytosol	52.5	52.21
Bra003009.1-P	Field mustard	cytosol	50.56	52.0
Bra019031.1-P	Field mustard	cytosol	52.22	51.23
CDY19037	Canola	cytosol	52.5	51.22
CDY29856	Canola	cytosol	51.39	50.41
CDX92835	Canola	cytosol	51.39	50.41
CDY19039	Canola	cytosol	47.78	48.86
CDY28789	Canola	cytosol	47.78	47.65
Bra022700.1-P	Field mustard	cytosol	47.78	47.65
KRH14071	Soybean	cytosol	27.22	47.57
CDY41780	Canola	cytosol	32.78	46.09
VIT_16s0098g00850.t01	Wine grape	cytosol	56.39	27.43

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCSU01G152500	EnsemblPlants:TraesCSU01G152500.1	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:189304063..189308405

Molecular Weight (calculated)

39261.8 Da

IEP (calculated)

5.740

GRAVY (calculated)

0.063

Length

360 amino acids

Sequence
(BLAST)

001: MGSEMVAGPA AGDEEACMYA MRLAAASILP MTLKGAELGM LEVLVSAGGE MLSPSEVIAR LPSKAANPDA PAMVDRILRL LASYNVVLCE VDEGEDGLFA
101: RRYGSAPVCK WLTPNEDGVS IAALVLMIQD KVNMEGWYHL KDAVLDGGLP FQRAYGMTLF VYNSRNMHVN SMFNEAMKNH STIITKKLLE FYMGFDSVGT
201: LVDVAGGVGA TIHTITSKYP HIKGVNFDLP HVISDAPSFP GVEHVGGDMF EKVPSGDAIL LKWILHDWTD KHCTNLLRNC FDALPAHGKV IVMEGILPLK
301: PDSTSRGQLM SLGDMIMLMH TPGGKERQQR EFEELARGAG FTSVKTTHIY GNAWVIEFIK

Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.