Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G54160.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G066100.1 | Wheat | cytosol | 95.52 | 95.52 |
| TraesCS2A01G051600.2 | Wheat | cytosol | 95.24 | 95.24 |
| TraesCSU01G183500.1 | Wheat | cytosol | 28.57 | 91.07 |
| TraesCSU01G013300.1 | Wheat | cytosol | 89.08 | 89.08 |
| TraesCSU01G001300.1 | Wheat | cytosol | 22.69 | 72.32 |
| TraesCSU01G152500.1 | Wheat | cytosol | 69.47 | 68.89 |
| HORVU1Hr1G089620.1 | Barley | cytosol | 63.31 | 60.27 |
| Solyc03g080180.2.1 | Tomato | extracellular | 53.22 | 53.22 |
| PGSC0003DMT400001512 | Potato | cytosol | 53.78 | 52.89 |
| KRH64288 | Soybean | cytosol, nucleus | 52.94 | 51.78 |
| KRH53638 | Soybean | mitochondrion | 52.38 | 51.23 |
| KRH53640 | Soybean | cytosol | 52.38 | 51.23 |
| KRH64289 | Soybean | cytosol | 47.62 | 51.05 |
| CDY18302 | Canola | cytosol | 29.41 | 50.97 |
| CDY18304 | Canola | cytosol | 29.41 | 50.97 |
| KRH53639 | Soybean | cytosol | 52.1 | 50.82 |
| CDY14330 | Canola | cytosol | 51.26 | 50.55 |
| AT5G54160.1 | Thale cress | cytosol | 51.26 | 50.41 |
| Bra003009.1-P | Field mustard | cytosol | 49.3 | 50.29 |
| CDY18306 | Canola | cytosol | 51.26 | 50.27 |
| CDY55338 | Canola | cytosol | 41.46 | 50.0 |
| Bra026320.1-P | Field mustard | cytosol | 41.46 | 50.0 |
| Bra019031.1-P | Field mustard | cytosol | 51.26 | 49.86 |
| CDY43839 | Canola | cytosol | 50.7 | 49.73 |
| Bra003007.1-P | Field mustard | cytosol | 50.42 | 49.45 |
| CDY43052 | Canola | cytosol | 50.42 | 49.45 |
| CDY14328 | Canola | cytosol | 50.42 | 49.45 |
| Bra029041.1-P | Field mustard | cytosol | 50.42 | 49.45 |
| CDY29856 | Canola | cytosol | 50.7 | 49.32 |
| CDX92835 | Canola | cytosol | 50.42 | 49.05 |
| CDY19037 | Canola | cytosol | 50.14 | 48.51 |
| CDY19039 | Canola | cytosol | 46.22 | 46.88 |
| KRH14071 | Soybean | cytosol | 26.61 | 46.12 |
| CDY28789 | Canola | cytosol | 45.66 | 45.15 |
| Bra022700.1-P | Field mustard | cytosol | 45.66 | 45.15 |
| CDY41780 | Canola | cytosol | 30.25 | 42.19 |
| VIT_16s0098g00850.t01 | Wine grape | cytosol | 53.78 | 25.95 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 |
| GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 |
| PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF114 | InterPro:Plant_MeTrfase_dimerisation |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCSU01G024300 | EnsemblPlants:TraesCSU01G024300.1 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | TIGR:cd02440 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:+:24672924..24674108
Molecular Weight (calculated)
38731.8 Da
IEP (calculated)
6.233
GRAVY (calculated)
-0.010
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMGAEMAA VEEEACIYAM QLSSTAVLPL TLKNAIELGM LEILVAAGGK MLSPSEVSAR LPSTATNPDA PAMVDRMLHL LASYKVVSCE VDEGTHARRY
101: GPTPVCKWFT PNQDGISMAP LLLLTNDKVP MESLYHLKDA VLDGGLPFHK AHGMTMYEYT KTDARLNRVF NEAMKSYTTI VTGKLVELYT GFHDVATLVD
201: VGGGVGATIR AVTSKYPHIK GINFDLAHVI AEAPQSPGVE HVAGDMFKNV PSGDAIVLKW ILHNWTDEQC TTLLRNCYDA LPAHGKVVVV EGILPVKPEA
301: TSRGQQASLS DMIMLTHTAG GKERNQREFE ELAKAGGFTG VKTAYIYSNT WVIEFTK
101: GPTPVCKWFT PNQDGISMAP LLLLTNDKVP MESLYHLKDA VLDGGLPFHK AHGMTMYEYT KTDARLNRVF NEAMKSYTTI VTGKLVELYT GFHDVATLVD
201: VGGGVGATIR AVTSKYPHIK GINFDLAHVI AEAPQSPGVE HVAGDMFKNV PSGDAIVLKW ILHNWTDEQC TTLLRNCYDA LPAHGKVVVV EGILPVKPEA
301: TSRGQQASLS DMIMLTHTAG GKERNQREFE ELAKAGGFTG VKTAYIYSNT WVIEFTK
001: MTNHLQDPLP TYPKPVLTKE EQEVDEKMVS LQAESIVNTV AFPMVLKAAF ELGVIDTIAA AGNDTWLSPC EIACSLPTKP TNPEAPVLLD RMLSLLVSHS
101: ILKCRMIETG ENGRTGKIER VYAAEPVCKY FLRDSDGTGS LVPLFMLLHT QVFFKTWTNL KDVILEGRDA FNSAHGMKIF EYINSDQPFA ELFNRAMSEP
201: STMIMKKVLD VYRGFEDVNT LVDVGGGNGT VLGLVTSKYP HIKGVNFDLA QVLTQAPFYP GVEHVSGDMF VEVPKGDAVF MKWILHDWGD EDCIKILKNC
301: WKSLPEKGKI IIVEFVTPKE PKGGDLSSNT VFAMDLLMLT QCSGGKERSL SQFENLAFAS GFLRCEIICL AYSYSVIEFH K
101: ILKCRMIETG ENGRTGKIER VYAAEPVCKY FLRDSDGTGS LVPLFMLLHT QVFFKTWTNL KDVILEGRDA FNSAHGMKIF EYINSDQPFA ELFNRAMSEP
201: STMIMKKVLD VYRGFEDVNT LVDVGGGNGT VLGLVTSKYP HIKGVNFDLA QVLTQAPFYP GVEHVSGDMF VEVPKGDAVF MKWILHDWGD EDCIKILKNC
301: WKSLPEKGKI IIVEFVTPKE PKGGDLSSNT VFAMDLLMLT QCSGGKERSL SQFENLAFAS GFLRCEIICL AYSYSVIEFH K
Arabidopsis Description
O-methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9CAQ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.