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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G54160.1 CDY03088 AT2G01950.1 19000166
AT5G54160.1 CDY17621 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18302 Canola cytosol 100.0 100.0
KRH14071 Soybean cytosol 61.16 61.16
CDY14330 Canola cytosol 99.51 56.63
AT5G54160.1 Thale cress cytosol 91.26 51.79
CDY14328 Canola cytosol 90.29 51.1
CDY18306 Canola cytosol 90.29 51.1
CDY43052 Canola cytosol 90.29 51.1
CDY43839 Canola cytosol 90.29 51.1
TraesCS1D01G359500.1 Wheat cytosol 56.8 50.0
TraesCSU01G001300.1 Wheat cytosol 26.7 49.11
GSMUA_Achr2P04480_001 Banana cytosol 54.37 48.91
TraesCS4A01G344100.1 Wheat cytosol 54.85 48.29
HORVU7Hr1G088940.1 Barley cytosol 52.91 48.23
TraesCS2B01G065800.1 Wheat cytosol 25.73 47.32
TraesCSU01G183500.1 Wheat cytosol 25.73 47.32
KRH64288 Soybean cytosol, nucleus 81.55 46.03
KRH53640 Soybean cytosol 80.58 45.48
KRH53638 Soybean mitochondrion 80.1 45.21
KRH53639 Soybean cytosol 80.1 45.08
CDY28789 Canola cytosol 78.64 44.88
KRH64289 Soybean cytosol 70.39 43.54
HORVU3Hr1G049400.1 Barley cytosol 33.5 42.86
Solyc03g080180.2.1 Tomato extracellular 73.79 42.58
CDX92835 Canola cytosol 75.24 42.23
PGSC0003DMT400001512 Potato cytosol 74.27 42.15
CDY29856 Canola cytosol 74.76 41.96
Os04t0176200-00 Rice cytosol 46.6 40.85
GSMUA_Achr9P23460_001 Banana cytosol 65.53 40.42
CDY19039 Canola cytosol 68.93 40.34
CDY19037 Canola cytosol 69.9 39.02
CDY70033 Canola cytosol 42.23 37.83
TraesCS3D01G540200.1 Wheat cytosol 64.08 37.08
TraesCS3A01G534900.1 Wheat cytosol 63.11 36.52
TraesCS3B01G612000.1 Wheat cytosol 63.11 36.52
TraesCS7A01G333900.1 Wheat cytosol 63.59 36.39
TraesCS7D01G341500.1 Wheat cytosol, golgi, unclear 63.59 36.39
GSMUA_Achr9P23470_001 Banana cytosol 58.74 36.23
GSMUA_Achr3P27470_001 Banana cytosol 63.11 35.91
HORVU7Hr1G082280.1 Barley cytosol 62.62 35.83
TraesCS7B01G245500.1 Wheat cytosol 62.62 35.83
TraesCS6D01G008200.1 Wheat cytosol 61.16 35.69
CDY29477 Canola cytosol 49.51 35.54
TraesCS6B01G011100.1 Wheat cytosol 61.65 35.28
CDX68776 Canola cytosol 50.49 35.14
Zm00001d049541_P001 Maize cytosol, extracellular, mitochondrion 61.65 34.89
EES14578 Sorghum cytosol 61.16 34.81
TraesCS1B01G040400.1 Wheat cytosol 39.81 34.75
TraesCS6A01G005600.1 Wheat cytosol 59.22 34.56
GSMUA_Achr1P06370_001 Banana cytosol 61.16 34.52
TraesCS1A01G407500.1 Wheat cytosol 52.91 33.96
CDX96604 Canola cytosol 43.2 33.46
CDY55338 Canola cytosol 48.06 33.45
Os08t0157500-01 Rice cytosol, plasma membrane 59.71 33.42
TraesCS7D01G538900.1 Wheat endoplasmic reticulum, vacuole 56.8 33.24
GSMUA_Achr9P18820_001 Banana mitochondrion 55.83 32.95
GSMUA_Achr2P04360_001 Banana cytosol 57.77 32.78
GSMUA_AchrUn_... Banana cytosol 57.77 32.78
GSMUA_AchrUn_... Banana cytosol 47.57 32.45
GSMUA_Achr9P28010_001 Banana cytosol, plasma membrane, vacuole 55.83 32.21
GSMUA_Achr4P24480_001 Banana cytosol 56.31 32.13
TraesCS7D01G539100.1 Wheat cytosol 54.85 32.1
TraesCS5D01G488900.1 Wheat cytosol 54.85 32.01
HORVU3Hr1G116770.1 Barley cytosol 62.62 32.01
GSMUA_Achr10P... Banana cytosol 55.83 31.77
GSMUA_Achr2P04420_001 Banana cytosol 55.83 31.68
HORVU1Hr1G003370.2 Barley cytosol 54.37 31.64
TraesCS2B01G617300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 53.88 31.62
HORVU2Hr1G119660.1 Barley cytosol 55.34 31.49
GSMUA_Achr2P04860_001 Banana cytosol 55.34 31.32
TraesCS5D01G528600.1 Wheat cytosol 54.85 31.3
GSMUA_AchrUn_... Banana cytosol 54.85 31.22
GSMUA_Achr2P04380_001 Banana cytosol 54.85 31.04
TraesCS2D01G568300.1 Wheat cytosol 52.91 30.88
TraesCSU01G152500.1 Wheat cytosol 53.88 30.83
HORVU1Hr1G011930.1 Barley cytosol 52.43 30.68
TraesCS2B01G066100.1 Wheat cytosol 52.91 30.53
GSMUA_Achr2P04470_001 Banana cytosol 53.4 30.39
TraesCS5D01G488800.2 Wheat cytosol 53.4 30.39
TraesCS2A01G051600.2 Wheat cytosol 52.43 30.25
CDX87513 Canola cytosol 52.91 30.19
GSMUA_Achr2P04370_001 Banana cytosol 52.91 30.11
TraesCS5B01G036100.1 Wheat endoplasmic reticulum, vacuole 50.97 29.91
TraesCS5B01G036200.1 Wheat vacuole 50.97 29.91
GSMUA_Achr2P04410_001 Banana cytosol 52.43 29.83
CDY38339 Canola cytosol 54.85 29.66
HORVU4Hr1G001250.1 Barley cytosol 51.46 29.61
CDY23305 Canola cytosol 51.94 29.48
TraesCSU01G024300.1 Wheat cytosol 50.97 29.41
CDY59571 Canola cytosol 54.37 29.4
GSMUA_Achr2P04390_001 Banana cytosol 51.46 29.28
TraesCS2D01G052200.1 Wheat cytosol 50.0 29.1
HORVU1Hr1G089620.1 Barley cytosol 52.91 29.07
CDX85972 Canola cytosol 51.94 28.92
CDX87567 Canola cytosol 51.94 28.92
CDX88317 Canola cytosol 51.94 28.92
CDY63947 Canola cytosol 53.4 28.87
TraesCSU01G013300.1 Wheat cytosol 50.0 28.85
GSMUA_AchrUn_... Banana cytosol 50.49 28.81
CDX75190 Canola cytosol 48.54 28.65
CDX68056 Canola cytosol 52.91 28.61
CDX88377 Canola cytosol 52.43 28.57
CDY45380 Canola cytosol 52.43 28.57
CDY38336 Canola cytosol 51.94 28.53
GSMUA_Achr2P04820_001 Banana cytosol 45.15 28.35
CDY54913 Canola cytosol 52.43 28.35
Os04t0175900-01 Rice cytosol, plasma membrane 50.97 28.3
CDY44537 Canola cytosol 51.46 28.27
CDY00362 Canola cytosol 50.49 28.18
CDY01334 Canola cytosol 50.49 28.18
CDX79208 Canola cytosol 51.94 28.08
CDY49883 Canola cytosol 51.46 28.04
HORVU7Hr1G119480.2 Barley cytosol 48.54 28.01
GSMUA_AchrUn_... Banana cytosol, vacuole 49.03 27.98
Os04t0104900-01 Rice cytosol 48.06 27.97
GSMUA_Achr2P04840_001 Banana cytosol 40.78 27.81
CDX68055 Canola extracellular 45.63 27.81
CDY52173 Canola cytosol 49.03 27.6
CDY64795 Canola cytosol 49.03 27.6
CDY54813 Canola cytosol 48.54 27.47
CDY04597 Canola cytosol 49.51 27.42
CDY33668 Canola cytosol 49.51 27.42
CDY29475 Canola cytosol 49.51 27.35
CDX96602 Canola cytosol 49.51 27.27
CDY33669 Canola cytosol 49.51 27.27
Zm00001d048087_P001 Maize cytosol 48.06 27.12
OQU79974 Sorghum cytosol 48.54 27.1
CDY04598 Canola cytosol 49.03 27.08
Os04t0175600-01 Rice plasma membrane 49.51 26.98
CDY41780 Canola cytosol 33.5 26.95
CDY04600 Canola cytosol 49.03 26.93
CDY01335 Canola cytosol 48.06 26.83
CDY09082 Canola cytosol 25.73 26.77
EES13432 Sorghum cytosol, plastid, vacuole 48.54 26.74
Os12t0240900-01 Rice cytosol 48.54 26.67
OQU93005 Sorghum cytosol 47.09 26.65
CDX68054 Canola cytosol 48.54 26.45
CDX79210 Canola cytosol 48.54 26.45
KXG24554 Sorghum cytosol 48.06 26.33
GSMUA_Achr2P04400_001 Banana cytosol, golgi, mitochondrion 53.4 26.19
CDX94511 Canola cytosol 48.06 25.98
CDX84055 Canola cytosol 44.66 25.84
KXG24559 Sorghum cytosol 47.09 25.73
CDX72521 Canola cytosol 40.78 25.69
CDY01900 Canola cytosol 47.57 25.45
TraesCS3B01G448600.1 Wheat cytosol 45.63 25.41
CDY42934 Canola cytosol 48.06 25.32
CDY44972 Canola cytosol 44.17 25.21
CDX72522 Canola cytosol 38.84 25.0
CDY01333 Canola cytosol 45.15 24.8
CDX95399 Canola cytosol 42.72 24.51
CDX68085 Canola cytosol 38.84 24.46
TraesCS1D01G033700.1 Wheat cytosol 42.23 23.71
HORVU1Hr1G089700.1 Barley cytosol, vacuole 41.75 23.5
CDX76316 Canola cytosol 37.38 23.33
TraesCS1B01G041100.1 Wheat cytosol 41.26 23.16
CDY00361 Canola cytosol 44.17 22.98
TraesCS1A01G032000.1 Wheat cytosol 40.78 22.89
CDY67664 Canola cytosol 35.44 22.81
CDY17512 Canola cytosol 38.84 22.54
CDY17514 Canola cytosol 37.86 22.35
CDY49745 Canola cytosol 37.38 22.19
CDY00364 Canola cytosol 36.89 22.03
VIT_16s0098g00850.t01 Wine grape cytosol 78.64 21.89
CDY09084 Canola cytosol 35.44 21.47
GSMUA_AchrUn_... Banana cytosol 28.64 21.3
CDY51573 Canola cytosol 38.84 20.36
CDX76223 Canola cytosol 26.21 20.15
Os12t0202700-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 21.36 19.91
CDY52172 Canola cytosol 48.54 18.98
CDY67665 Canola cytosol 25.24 18.57
CDX84061 Canola cytosol 22.82 17.67
GSMUA_Achr9P23490_001 Banana cytosol 16.02 15.21
CDY64794 Canola cytosol 14.08 14.08
Os12t0199500-00 Rice cytosol 10.68 10.53
Protein Annotations
Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078FYQ3UniProt:A0A078FYQ3ProteinID:CDY18302.1EnsemblPlants:CDY18304
ProteinID:CDY18304ProteinID:CDY18304.1InterPro:De-COase2_CSGO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00002865001
InterPro:IPR016461InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891ScanProsite:PS00879PFscan:PS51683
PANTHER:PTHR11746PANTHER:PTHR11746:SF114InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EF14F2:
Description
BnaC09g30540DBnaC09g30520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYQ3]
Coordinates
chrLK032084:+:168976..169808
Molecular Weight (calculated)
22702.6 Da
IEP (calculated)
5.880
GRAVY (calculated)
0.018
Length
206 amino acids
Sequence
(BLAST)
001: MSAFEYHGTD LRFNKVFNNG MSNHSTITMK KILETYNGFE GLVSLVDVGG GIGATLKMIV SKYPNLKGIN FDLPHVIEDA PSHPGVEHVG GDMFVSVPKG
101: DAIFMKWICH DWSDEHCLKF LKNCYEALPE NGKVILAECI LPETLDSSLS TKQVVNVDCI MLALNPGGKE RTEKEYEALA KGSGFEGIKV VCNVFGVYVI
201: ELLKKI
Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)
001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
Arabidopsis Description
F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.