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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96604 Canola cytosol 68.82 96.24
CDY29477 Canola cytosol 71.24 92.33
CDY01335 Canola cytosol 90.86 91.6
CDY29475 Canola cytosol 91.67 91.42
CDY01334 Canola cytosol 90.59 91.33
CDY00362 Canola cytosol 90.59 91.33
CDX96602 Canola cytosol 91.67 91.18
CDY04598 Canola cytosol 90.86 90.62
CDY33669 Canola cytosol 90.59 90.11
CDY04597 Canola cytosol 90.05 90.05
CDY04600 Canola cytosol 89.25 88.53
CDY01333 Canola cytosol 87.37 86.67
CDY49745 Canola cytosol 79.84 85.59
CDY00364 Canola cytosol 78.76 84.93
CDY00361 Canola cytosol 82.8 77.78
CDX85972 Canola cytosol 72.58 72.97
CDX88317 Canola cytosol 70.97 71.35
CDX87567 Canola cytosol 70.7 71.08
CDX68085 Canola cytosol 62.1 70.64
CDX68776 Canola cytosol 44.62 56.08
CDX68056 Canola cytosol 56.45 55.12
CDX79208 Canola cytosol 55.11 53.81
CDY54913 Canola cytosol 54.84 53.54
CDY44537 Canola cytosol 53.76 53.33
CDY38336 Canola cytosol 53.76 53.33
CDY45380 Canola cytosol 54.03 53.17
CDX68055 Canola extracellular 48.12 52.96
CDY23305 Canola cytosol 51.61 52.89
CDY59571 Canola cytosol 54.03 52.76
CDY38339 Canola cytosol 54.03 52.76
CDY63947 Canola cytosol 53.76 52.49
CDY49883 Canola cytosol 53.23 52.38
CDX75190 Canola cytosol 47.85 51.0
CDX94511 Canola cytosol 52.15 50.92
CDY01900 Canola cytosol 52.42 50.65
CDX68054 Canola cytosol 51.34 50.53
CDX79210 Canola cytosol 50.81 50.0
CDX88377 Canola cytosol 50.81 50.0
CDY18302 Canola cytosol 27.42 49.51
CDY18304 Canola cytosol 27.42 49.51
CDY42934 Canola cytosol 51.88 49.36
CDX87513 Canola cytosol 47.31 48.75
CDY14330 Canola cytosol 44.35 45.58
CDY29856 Canola cytosol 44.09 44.69
CDY18306 Canola cytosol 43.28 44.23
CDX92835 Canola cytosol 43.55 44.14
CDY14328 Canola cytosol 42.74 43.68
CDY43839 Canola cytosol 42.74 43.68
CDY55338 Canola cytosol 34.68 43.58
CDY43052 Canola cytosol 42.47 43.41
CDY28789 Canola cytosol 40.32 41.55
CDY19037 Canola cytosol 41.13 41.46
CDY19039 Canola cytosol 37.9 40.06
CDX84055 Canola cytosol 37.37 39.04
CDY41780 Canola cytosol 26.61 38.67
CDY44972 Canola cytosol 37.1 38.23
VIT_10s0003g04160.t01 Wine grape cytosol 35.75 37.15
CDY52173 Canola cytosol 35.48 36.07
CDY54813 Canola cytosol 35.22 35.99
CDY64795 Canola cytosol 34.95 35.52
CDY70033 Canola cytosol 21.77 35.22
CDY64794 Canola cytosol 18.28 33.01
CDX95399 Canola cytosol 30.11 31.2
CDX76223 Canola cytosol 21.77 30.22
CDX84061 Canola cytosol 21.51 30.08
CDY09084 Canola cytosol 26.61 29.12
CDX76316 Canola cytosol 25.81 29.09
CDY09082 Canola cytosol 15.05 28.28
CDX72521 Canola cytosol 24.73 28.13
CDX72522 Canola cytosol 24.19 28.12
CDY17514 Canola cytosol 26.34 28.08
CDY17512 Canola cytosol 26.61 27.89
CDY51573 Canola cytosol 28.23 26.72
CDY67664 Canola cytosol 22.85 26.56
CDY67665 Canola cytosol 19.35 25.71
CDY52172 Canola cytosol 36.29 25.62
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078H9Z3UniProt:A0A078H9Z3EnsemblPlants:CDY33668
ProteinID:CDY33668ProteinID:CDY33668.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00055036001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EE23EAInterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaC08g19680DBnaC08g19680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9Z3]
Coordinates
chrLK032319:-:363505..365054
Molecular Weight (calculated)
40840.3 Da
IEP (calculated)
5.008
GRAVY (calculated)
0.032
Length
372 amino acids
Sequence
(BLAST)
001: MGILNEETLS SNPKSQVVID DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAASVF LSPSEIASRL PTTPRNPEAP ALLDRMLRLL ASYSMVKCGT
101: VQAKKDQRVY KAEPICRFFL KNNIQDIGSL ASQVIVNSDS VFLNTWAQLK DVVLKGGDAF GRAHGGMKLF DYMGTDERFS KLFNQTGFTI AVVKKALEVY
201: QGFKDVDVLV DVGGGVGNTL GVVTSNYPNI KGINFDLTCA LAQAPSYPGV EHVAGDMFVE VPKGDTMILK RILHDWTDED CIKILKNCRK SLPENGKVVV
301: IELVTPDNAE SGDINANIAF DMDMLMFTQC SGGKERSRAE FEALAMESGF THCKFVCQAY HCWIIEFCKE NV
Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Arabidopsis Description
IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.