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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96602 Canola cytosol 97.59 97.59
CDY29477 Canola cytosol 72.19 94.08
CDY04598 Canola cytosol 93.05 93.3
CDY29475 Canola cytosol 92.78 93.03
CDY01335 Canola cytosol 91.18 92.41
CDY04600 Canola cytosol 91.44 91.2
CDY04597 Canola cytosol 90.64 91.13
CDY01333 Canola cytosol 91.18 90.93
CDX96604 Canola cytosol 64.44 90.6
CDY33668 Canola cytosol 90.11 90.59
CDY49745 Canola cytosol 83.69 90.2
CDY00362 Canola cytosol 88.77 89.97
CDY01334 Canola cytosol 88.5 89.7
CDY00364 Canola cytosol 82.62 89.57
CDY00361 Canola cytosol 82.09 77.53
CDX85972 Canola cytosol 71.39 72.16
CDX88317 Canola cytosol 70.05 70.81
CDX87567 Canola cytosol 69.79 70.54
CDX68085 Canola cytosol 60.7 69.42
CDX68776 Canola cytosol 45.99 58.11
CDX68056 Canola cytosol 57.49 56.43
CDX79208 Canola cytosol 56.42 55.38
CDY54913 Canola cytosol 55.62 54.59
CDY23305 Canola cytosol 52.94 54.55
CDY38336 Canola cytosol 53.74 53.6
CDY38339 Canola cytosol 54.55 53.54
CDY59571 Canola cytosol 54.55 53.54
CDY44537 Canola cytosol 53.48 53.33
CDY63947 Canola cytosol 54.28 53.28
CDX68055 Canola extracellular 48.13 53.25
CDY45380 Canola cytosol 53.74 53.17
CDY49883 Canola cytosol 53.21 52.65
CDX75190 Canola cytosol 48.66 52.15
CDX68054 Canola cytosol 52.14 51.59
CDX94511 Canola cytosol 51.87 50.92
CDX79210 Canola cytosol 51.34 50.79
CDY01900 Canola cytosol 51.87 50.39
CDX87513 Canola cytosol 48.13 49.86
CDX88377 Canola cytosol 50.27 49.74
CDY18302 Canola cytosol 27.27 49.51
CDY18304 Canola cytosol 27.27 49.51
CDY42934 Canola cytosol 51.34 49.1
CDY14330 Canola cytosol 44.12 45.58
CDY29856 Canola cytosol 43.85 44.69
CDY43839 Canola cytosol 43.32 44.51
CDY18306 Canola cytosol 43.05 44.23
CDY43052 Canola cytosol 43.05 44.23
CDY14328 Canola cytosol 42.78 43.96
CDX92835 Canola cytosol 43.05 43.87
CDY55338 Canola cytosol 34.22 43.24
CDY28789 Canola cytosol 41.44 42.94
CDY19037 Canola cytosol 40.64 41.19
CDY19039 Canola cytosol 38.24 40.62
CDX84055 Canola cytosol 37.43 39.33
CDY41780 Canola cytosol 26.47 38.67
CDY44972 Canola cytosol 37.17 38.5
VIT_10s0003g04160.t01 Wine grape cytosol 36.1 37.71
CDY52173 Canola cytosol 36.63 37.43
CDY64795 Canola cytosol 35.29 36.07
CDY54813 Canola cytosol 35.03 35.99
CDY70033 Canola cytosol 21.93 35.65
CDY64794 Canola cytosol 19.25 34.95
CDX95399 Canola cytosol 30.21 31.48
CDX84061 Canola cytosol 21.93 30.83
CDX76223 Canola cytosol 21.66 30.22
CDX76316 Canola cytosol 24.87 28.18
CDY09084 Canola cytosol 25.4 27.94
CDX72521 Canola cytosol 24.33 27.83
CDY17512 Canola cytosol 26.2 27.61
CDY17514 Canola cytosol 25.4 27.22
CDX72522 Canola cytosol 23.26 27.19
CDY09082 Canola cytosol 14.17 26.77
CDY52172 Canola cytosol 36.36 25.81
CDY67664 Canola cytosol 21.93 25.62
CDY67665 Canola cytosol 18.98 25.36
CDY51573 Canola cytosol 26.47 25.19
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078H851UniProt:A0A078H851EnsemblPlants:CDY33669
ProteinID:CDY33669ProteinID:CDY33669.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00055037001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EDAEF3InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaC08g19690DBnaC08g19690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H851]
Coordinates
chrLK032319:-:374931..376231
Molecular Weight (calculated)
41244.6 Da
IEP (calculated)
4.663
GRAVY (calculated)
0.037
Length
374 amino acids
Sequence
(BLAST)
001: MGFPFEETLS SNLKTQTVID DDNELGLMAV RLANAAAFPM VLKASLELGV FDTLYAEAAR TDAFLSPSEI ASRLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCDKFGKGER VYRAEPICRF FLKDNIQDIG SLASQVIVNF DSVFLNTWAQ LKDVVLEGGD AFGRAHGGMK LFDYMGTDER FSKLFNQTGF TIAVVKKALE
201: VYQGFKDVDV LVDVGGGVGN TLGVVTSKYP NIKGVNFDLT CALAQAPSYP GVEHVAGDMF VEVPKGAAMI LKRILHDWTD EDCVKILKNC WKSLPENGKV
301: VVIELVTPDD ADNGDINANI AFDMDMLMFT QCSGGKERSR DEFEALAIAS GFTHCKFVCQ AYHCWIIEFC KENV
Best Arabidopsis Sequence Match ( AT1G21120.2 )
(BLAST)
001: MHQKYTNSSS QHYKKETNTL SRYIFPHFDQ FDHVECLEGE ESNKKEREMG YLFEETLSSN PKTPIVVDDD NELGLMAVRL ANAAAFPMVL KASLELGVFD
101: TLYAEASRTD SFLSPSEIAS KLPTTPRNPG APVLLDRMLR LLASYSMVKC EKVSVGKGER VYRAEPICRF FLKNNIQDIG SLASQVIVNF DSVFLNTWAQ
201: LKDVVLEGGD AFGRAHGGMK LFDYMGTDER FSKLFNQTGF TIAVVKKALE VYQGFKGVNV LVDVGGGVGN TLGVVTSKYP NIKGINFDLT CALAQAPSYP
301: GVEHVAGDMF VDVPTGDAMI LKRILHDWTD EDCVKILKNC WKSLPENGKV VVIELVTPDE AENGDINANI AFDMDMLMFT QCSGGKERSR AEFEALAAAS
401: CFTHCKFVCQ AYHCWIIEFC K
Arabidopsis Description
O-methyltransferase family protein [Source:TAIR;Acc:AT1G21120]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.