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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol 44.35 69.39
Bra040689.1-P Field mustard cytosol 99.57 63.79
CDX95399 Canola cytosol 99.57 63.79
HORVU6Hr1G092780.2 Barley cytosol 36.09 61.03
AT3G53140.1 Thale cress cytosol 93.48 59.89
VIT_08s0007g04520.t01 Wine grape cytosol 79.57 51.12
CDX76223 Canola cytosol 58.7 50.37
KRH13467 Soybean cytosol 73.48 47.47
KRH21852 Soybean cytosol, nucleus 72.61 47.04
PGSC0003DMT400022143 Potato cytosol 70.87 45.15
Solyc10g085830.1.1 Tomato plastid 69.57 44.32
CDY18304 Canola cytosol 37.83 42.23
CDY18302 Canola cytosol 37.83 42.23
Os02t0823400-01 Rice cytosol 63.91 40.27
TraesCS6A01G405200.1 Wheat cytosol 62.17 39.39
Zm00001d051870_P001 Maize cytosol 63.91 39.3
EES06050 Sorghum cytosol, plastid 63.91 38.99
TraesCS6D01G388700.1 Wheat cytosol 62.61 38.92
TraesCS6B01G449400.1 Wheat cytosol 62.17 38.65
CDY29477 Canola cytosol 36.09 28.92
CDX68776 Canola cytosol 35.22 27.36
CDY14330 Canola cytosol 40.87 25.97
CDX96604 Canola cytosol 30.0 25.94
CDY43839 Canola cytosol 40.87 25.82
CDY18306 Canola cytosol 40.87 25.82
CDY14328 Canola cytosol 40.43 25.55
CDY43052 Canola cytosol 40.43 25.55
CDY19037 Canola cytosol 40.43 25.2
CDY19039 Canola cytosol 37.83 24.72
CDX92835 Canola cytosol 39.13 24.52
CDY29856 Canola cytosol 39.13 24.52
CDY54813 Canola cytosol 38.26 24.18
HORVU6Hr1G092840.2 Barley cytosol 30.87 24.15
CDY28789 Canola cytosol 37.83 24.1
CDX87513 Canola cytosol 37.83 24.1
CDY09082 Canola cytosol 20.43 23.74
CDX84055 Canola cytosol 36.09 23.31
CDX75190 Canola cytosol 35.22 23.21
CDY44972 Canola cytosol 36.09 22.99
CDX68055 Canola extracellular 33.48 22.78
CDY04598 Canola cytosol 36.52 22.52
CDY29475 Canola cytosol 36.52 22.52
CDX88377 Canola cytosol 36.96 22.49
CDY04597 Canola cytosol 36.09 22.31
CDX96602 Canola cytosol 36.09 22.19
CDX88317 Canola cytosol 35.65 22.16
CDX87567 Canola cytosol 35.65 22.16
CDY01333 Canola cytosol 36.09 22.13
CDY04600 Canola cytosol 36.09 22.13
CDY23305 Canola cytosol 34.78 22.04
CDY55338 Canola cytosol 28.26 21.96
CDY01335 Canola cytosol 35.22 21.95
CDY33669 Canola cytosol 35.65 21.93
CDY52173 Canola cytosol 34.78 21.86
CDX68056 Canola cytosol 36.09 21.78
CDY33668 Canola cytosol 35.22 21.77
CDY00362 Canola cytosol 34.78 21.68
CDY01334 Canola cytosol 34.78 21.68
CDX85972 Canola cytosol 34.78 21.62
CDY64795 Canola cytosol 34.35 21.58
CDX68054 Canola cytosol 35.22 21.43
CDY45380 Canola cytosol 35.22 21.43
CDX79208 Canola cytosol 35.22 21.26
CDY49883 Canola cytosol 34.78 21.16
CDX94511 Canola cytosol 34.78 21.0
CDY42934 Canola cytosol 35.22 20.72
CDX79210 Canola cytosol 33.91 20.63
CDY38336 Canola cytosol 33.48 20.53
CDY44537 Canola cytosol 33.48 20.53
CDX72521 Canola cytosol 29.13 20.49
CDY63947 Canola cytosol 33.91 20.47
CDY09084 Canola cytosol 30.0 20.29
CDY49745 Canola cytosol 30.43 20.17
CDX72522 Canola cytosol 27.83 20.0
CDY00364 Canola cytosol 29.57 19.71
CDY54913 Canola cytosol 32.61 19.68
CDY38339 Canola cytosol 32.61 19.68
CDY59571 Canola cytosol 32.61 19.68
CDY17512 Canola cytosol 30.0 19.44
CDX76316 Canola cytosol 27.39 19.09
CDY67664 Canola cytosol 26.52 19.06
CDX68085 Canola cytosol 26.96 18.96
CDY00361 Canola cytosol 32.61 18.94
CDY17514 Canola cytosol 28.26 18.62
CDY51573 Canola cytosol 31.74 18.58
CDY01900 Canola cytosol 30.43 18.18
CDY67665 Canola cytosol 19.57 16.07
CDY52172 Canola cytosol 35.65 15.56
CDY41780 Canola cytosol 16.09 14.45
CDX84061 Canola cytosol 16.52 14.29
CDY64794 Canola cytosol 12.17 13.59
Protein Annotations
Gene3D:3.40.50.150MapMan:7.9.6.1GO:A0A078JR17UniProt:A0A078JR17EnsemblPlants:CDY70033ProteinID:CDY70033
ProteinID:CDY70033.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0008171GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00095982001InterPro:IPR016461InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2PFAM:PF00891PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF90InterPro:SAM-dependent_MTases
SUPFAM:SSF53335UniParc:UPI0004EE1A53::::
Description
BnaCnng66420DBnaCnng66420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JR17]
Coordinates
chrLK040977:-:1748..3533
Molecular Weight (calculated)
25874.3 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.193
Length
230 amino acids
Sequence
(BLAST)
001: MRAWPLVHTA VVEPETEPYV KANGEAAYAQ YGKCEEMNGL MQKAMSGVSV PFMKAILDGY DGFKYVEHLV DVGGSAGDCL RMIIKQFPNV RQGINFDLPE
101: VVAKAPKIPG VTHMGGDMFQ SVPSGDAIFM KWVLTTWTDE ECKQIMKNCY KALPVGGKLV ACEPVLPKET DDSHRTRALL EGDIFVMTIY RTKGKHRTEE
201: EFKELGLSAG FSTFRPFYID YFYTILEFQK
Best Arabidopsis Sequence Match ( AT3G53140.1 )
(BLAST)
001: MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK
Arabidopsis Description
AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.