Factsheet for TraesCS6D01G388700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G449400.1	Wheat	cytosol	97.03	97.03
TraesCS6A01G405200.1	Wheat	cytosol	95.14	96.97
HORVU6Hr1G092780.2	Barley	cytosol	32.97	89.71
Os02t0823400-01	Rice	cytosol	82.7	83.84
Zm00001d051870_P001	Maize	cytosol	83.24	82.35
EES06050	Sorghum	cytosol, plastid	83.78	82.23
HORVU6Hr1G092840.2	Barley	cytosol	62.97	79.25
GSMUA_Achr11P...	Banana	cytosol	29.19	73.47
KRH21852	Soybean	cytosol, nucleus	60.81	63.38
KRH13467	Soybean	cytosol	60.81	63.2
CDY70033	Canola	cytosol	38.92	62.61
AT3G53140.1	Thale cress	cytosol	59.19	61.0
VIT_08s0007g04520.t01	Wine grape	cytosol	57.3	59.22
Bra040689.1-P	Field mustard	cytosol	57.3	59.05
CDX95399	Canola	cytosol	56.76	58.5
Solyc10g085830.1.1	Tomato	plastid	55.41	56.79
PGSC0003DMT400022143	Potato	cytosol	55.14	56.51
CDX76223	Canola	cytosol	40.27	55.6
TraesCS1D01G359500.1	Wheat	cytosol	24.86	39.32
TraesCS7D01G539100.1	Wheat	cytosol	35.95	37.78
TraesCS6D01G008200.1	Wheat	cytosol	35.95	37.68
TraesCS5D01G488900.1	Wheat	cytosol	35.68	37.39
TraesCS7D01G538900.1	Wheat	endoplasmic reticulum, vacuole	35.41	37.22
TraesCS7D01G341500.1	Wheat	cytosol, golgi, unclear	35.95	36.94
TraesCS5D01G488800.2	Wheat	cytosol	35.95	36.74
TraesCS3D01G540200.1	Wheat	cytosol	35.14	36.52
TraesCS2D01G052200.1	Wheat	cytosol	34.32	35.88
TraesCS5D01G528600.1	Wheat	cytosol	34.86	35.73
TraesCS2D01G568300.1	Wheat	cytosol	34.05	35.69
TraesCS1D01G033700.1	Wheat	cytosol	35.14	35.42

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:7.9.6.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0008938	GO:GO:0009987	GO:GO:0016740	GO:GO:1901847
InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PIRSF:PIRSF005739
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF90	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335
EnsemblPlantsGene:TraesCS6D01G388700	EnsemblPlants:TraesCS6D01G388700.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	TIGR:cd02440	SEG:seg

Description

No Description!

Coordinates

chr6D:-:464761976..464766165

Molecular Weight (calculated)

39562.5 Da

IEP (calculated)

4.912

GRAVY (calculated)

0.019

Length

370 amino acids

Sequence
(BLAST)

001: MSSTPTQPPA AEPATATGAE MSPPEARLAM MELANMIAVP MALTAVIRLG VPAAVWAGGA NAPLSAAELL PPGHPDPSVL ERLLRLLASR GVFSEHAADG
101: RPERRYALTA VGRTLVPSGA SGASYADYVL QHHQDALVLA WPRLHEAVLD PAGPEPFARA HAGVPAYAYY GQDREANEVM LRAMTGVSEP FMEALLDGYE
201: GGFEGVATLV DVGGSSGACL EMIMRRVPTI REGVNFDLPD VVAAAPPIAG VKHVGGDMFK SIPSGDAIFM KWVLTTWTND ECTAILKKCH EALPKGGKLI
301: ACEPVVPETT DASTRTRALL ENDIFVMTTY RTQGRERSEE EFRQLGLTAG FAGFRALYLD PFYAVLEYVK

Best Arabidopsis Sequence Match ( AT3G53140.1 )
(BLAST)

001: MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK

Arabidopsis Description

AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.