Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70033 | Canola | cytosol | 59.89 | 93.48 |
| Bra040689.1-P | Field mustard | cytosol | 91.09 | 91.09 |
| CDX95399 | Canola | cytosol | 90.81 | 90.81 |
| CDX76223 | Canola | cytosol | 66.02 | 88.43 |
| VIT_08s0007g04520.t01 | Wine grape | cytosol | 76.88 | 77.09 |
| KRH21852 | Soybean | cytosol, nucleus | 74.65 | 75.49 |
| KRH13467 | Soybean | cytosol | 73.54 | 74.16 |
| GSMUA_Achr11P... | Banana | cytosol | 28.97 | 70.75 |
| PGSC0003DMT400022143 | Potato | cytosol | 70.47 | 70.08 |
| Solyc10g085830.1.1 | Tomato | plastid | 68.52 | 68.14 |
| HORVU6Hr1G092780.2 | Barley | cytosol | 23.96 | 63.24 |
| TraesCS6A01G405200.1 | Wheat | cytosol | 60.72 | 60.06 |
| TraesCS6B01G449400.1 | Wheat | cytosol | 61.0 | 59.19 |
| TraesCS6D01G388700.1 | Wheat | cytosol | 61.0 | 59.19 |
| Os02t0823400-01 | Rice | cytosol | 60.17 | 59.18 |
| EES06050 | Sorghum | cytosol, plastid | 60.17 | 57.29 |
| Zm00001d051870_P001 | Maize | cytosol | 59.61 | 57.22 |
| HORVU6Hr1G092840.2 | Barley | cytosol | 40.39 | 49.32 |
| AT5G54160.1 | Thale cress | cytosol | 37.6 | 37.19 |
| AT1G62900.1 | Thale cress | cytosol | 20.61 | 36.1 |
| AT5G53810.1 | Thale cress | cytosol | 33.98 | 32.28 |
| AT1G51990.1 | Thale cress | cytosol | 32.31 | 31.96 |
| AT1G76790.1 | Thale cress | cytosol | 32.31 | 31.61 |
| AT1G33030.1 | Thale cress | cytosol | 30.92 | 31.53 |
| AT1G77520.1 | Thale cress | cytosol | 33.43 | 31.5 |
| AT1G21130.1 | Thale cress | cytosol | 32.59 | 31.37 |
| AT1G77530.1 | Thale cress | cytosol | 33.15 | 31.23 |
| AT1G21100.1 | Thale cress | cytosol | 32.31 | 31.1 |
| AT1G21110.1 | Thale cress | cytosol | 31.2 | 30.03 |
| AT5G37170.1 | Thale cress | cytosol | 26.74 | 28.74 |
| AT1G63140.4 | Thale cress | cytosol | 31.2 | 27.93 |
| AT1G21120.2 | Thale cress | cytosol | 31.48 | 26.84 |
| AT4G35150.1 | Thale cress | cytosol | 23.96 | 26.46 |
| AT4G35160.1 | Thale cress | cytosol | 27.3 | 25.65 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:7.9.6.1 | EntrezGene:824480 | UniProt:A0A178VFV7 | ProteinID:AEE79041.1 |
| EMBL:AF367289 | ArrayExpress:AT3G53140 | EnsemblPlantsGene:AT3G53140 | RefSeq:AT3G53140 | TAIR:AT3G53140 | RefSeq:AT3G53140-TAIR-G |
| EnsemblPlants:AT3G53140.1 | TAIR:AT3G53140.1 | EMBL:AY133618 | ProteinID:CAB64217.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0008757 |
| GO:GO:0008938 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019438 | GO:GO:0032259 |
| GO:GO:0046983 | GO:GO:1901847 | InterPro:IPR016461 | InterPro:IPR036388 | RefSeq:NP_190882.1 | InterPro:O-MeTrfase_COMT |
| ProteinID:OAP03752.1 | InterPro:O_MeTrfase_2 | PFAM:PF00891 | PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 |
| PANTHER:PTHR11746 | PANTHER:PTHR11746:SF90 | InterPro:Plant_MeTrfase_dimerisation | UniProt:Q9SCP7 | InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 |
| SUPFAM:SSF53335 | UniParc:UPI0000048846 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : |
Description
AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7]
Coordinates
chr3:+:19695643..19697542
Molecular Weight (calculated)
39690.8 Da
IEP (calculated)
5.122
GRAVY (calculated)
-0.096
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.