Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G63140.4 | Thale cress | cytosol | 99.02 | 50.62 |
| CDY49883 | Canola | cytosol | 78.54 | 42.59 |
| CDY45380 | Canola | cytosol | 78.54 | 42.59 |
| Bra027815.1-P | Field mustard | cytosol | 77.07 | 41.8 |
| AT1G77520.1 | Thale cress | cytosol | 77.07 | 41.47 |
| CDY01900 | Canola | cytosol | 76.59 | 40.78 |
| CDX94511 | Canola | cytosol | 75.61 | 40.68 |
| AT1G77530.1 | Thale cress | cytosol | 75.61 | 40.68 |
| AT5G37170.1 | Thale cress | cytosol | 64.88 | 39.82 |
| CDY42934 | Canola | cytosol | 73.66 | 38.62 |
| AT5G53810.1 | Thale cress | cytosol | 64.88 | 35.19 |
| AT1G76790.1 | Thale cress | cytosol | 57.56 | 32.15 |
| AT1G21100.1 | Thale cress | cytosol | 57.07 | 31.37 |
| AT1G21130.1 | Thale cress | cytosol | 57.07 | 31.37 |
| AT1G21110.1 | Thale cress | cytosol | 56.59 | 31.1 |
| AT5G54160.1 | Thale cress | cytosol | 53.66 | 30.3 |
| AT1G21120.2 | Thale cress | cytosol | 57.07 | 27.79 |
| AT1G51990.1 | Thale cress | cytosol | 46.83 | 26.45 |
| AT1G33030.1 | Thale cress | cytosol | 42.93 | 25.0 |
| VIT_10s0003g04160.t01 | Wine grape | cytosol | 42.93 | 24.58 |
| AT4G35150.1 | Thale cress | cytosol | 35.12 | 22.15 |
| AT4G35160.1 | Thale cress | cytosol | 38.54 | 20.68 |
| AT3G53140.1 | Thale cress | cytosol | 36.1 | 20.61 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:50.2.1 | EntrezGene:842591 | ProteinID:AAF75800.1 | ProteinID:AEE34019.1 | ArrayExpress:AT1G62900 |
| EnsemblPlantsGene:AT1G62900 | RefSeq:AT1G62900 | TAIR:AT1G62900 | RefSeq:AT1G62900-TAIR-G | EnsemblPlants:AT1G62900.1 | TAIR:AT1G62900.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 |
| GO:GO:0008757 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019438 | GO:GO:0032259 |
| InterPro:IPR016461 | RefSeq:NP_176478.1 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 | PFscan:PS51683 |
| PANTHER:PTHR11746 | PANTHER:PTHR11746:SF118 | UniProt:Q9LQ17 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI00000483E8 |
| SEG:seg | : | : | : | : | : |
Description
F16P17.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ17]
Coordinates
chr1:+:23297720..23298682
Molecular Weight (calculated)
22927.9 Da
IEP (calculated)
5.323
GRAVY (calculated)
0.046
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVFELIGSN EQFAEMFNRT MSEASTLIMK KVLEVYKGFE DVNTLVDVGG GIGTIIGQVT SKYPHIKGIN FDLASVLAHA PFNKGVEHVS GDMFKEIPKG
101: DAIFMKWILH DWTDEDCVKI LKNYWKSLPE KGKVIIVEVV TPEEPKINDI SSNIVFGMDM LMLAVSSGGK ERSLSQFETL ASDSGFLRCE IICHAFSYSV
201: IELHK
101: DAIFMKWILH DWTDEDCVKI LKNYWKSLPE KGKVIIVEVV TPEEPKINDI SSNIVFGMDM LMLAVSSGGK ERSLSQFETL ASDSGFLRCE IICHAFSYSV
201: IELHK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.