Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033498.1-P | Field mustard | cytosol | 61.43 | 76.11 |
| CDY64795 | Canola | cytosol | 75.48 | 74.86 |
| CDY52173 | Canola | cytosol | 72.73 | 72.13 |
| CDY64794 | Canola | cytosol | 38.57 | 67.96 |
| CDY54813 | Canola | cytosol | 65.01 | 64.84 |
| Bra035482.1-P | Field mustard | cytosol | 65.01 | 64.84 |
| CDX84061 | Canola | cytosol | 42.7 | 58.27 |
| PGSC0003DMT400051777 | Potato | cytosol | 23.69 | 53.75 |
| CDY52172 | Canola | cytosol | 75.21 | 51.8 |
| Solyc06g083450.2.1 | Tomato | cytosol | 31.41 | 49.57 |
| AT1G62900.1 | Thale cress | cytosol | 26.45 | 46.83 |
| AT5G54160.1 | Thale cress | cytosol | 46.01 | 46.01 |
| PGSC0003DMT400051773 | Potato | cytosol | 43.25 | 44.1 |
| PGSC0003DMT400051785 | Potato | cytosol | 44.08 | 44.08 |
| PGSC0003DMT400051781 | Potato | cytosol | 42.98 | 43.21 |
| PGSC0003DMT400038092 | Potato | cytosol | 39.94 | 41.67 |
| Solyc06g007960.2.1 | Tomato | cytosol | 39.39 | 39.61 |
| AT1G21130.1 | Thale cress | cytosol | 39.12 | 38.07 |
| AT1G21100.1 | Thale cress | cytosol | 38.84 | 37.8 |
| AT1G76790.1 | Thale cress | cytosol | 38.02 | 37.6 |
| AT1G77530.1 | Thale cress | cytosol | 39.39 | 37.53 |
| AT5G53810.1 | Thale cress | cytosol | 38.84 | 37.3 |
| AT1G21110.1 | Thale cress | cytosol | 38.29 | 37.27 |
| AT1G77520.1 | Thale cress | cytosol | 38.57 | 36.75 |
| AT1G33030.1 | Thale cress | cytosol | 35.26 | 36.36 |
| AT5G37170.1 | Thale cress | cytosol | 31.68 | 34.43 |
| AT1G63140.4 | Thale cress | cytosol | 36.91 | 33.42 |
| AT1G21120.2 | Thale cress | cytosol | 38.02 | 32.78 |
| AT3G53140.1 | Thale cress | cytosol | 31.96 | 32.31 |
| AT4G35150.1 | Thale cress | cytosol | 25.34 | 28.31 |
| AT4G35160.1 | Thale cress | cytosol | 28.93 | 27.49 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | EntrezGene:841628 | ProteinID:AAD12674.1 | ProteinID:AEE32744.1 |
| ArrayExpress:AT1G51990 | EnsemblPlantsGene:AT1G51990 | RefSeq:AT1G51990 | TAIR:AT1G51990 | RefSeq:AT1G51990-TAIR-G | EnsemblPlants:AT1G51990.1 |
| TAIR:AT1G51990.1 | Unigene:At.52150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 | GO:GO:0032259 |
| GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 | RefSeq:NP_175611.1 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 |
| PFAM:PF00891 | PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF114 |
| InterPro:Plant_MeTrfase_dimerisation | UniProt:Q9ZU24 | InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | UniParc:UPI0000048381 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : | : |
Description
F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
Coordinates
chr1:+:19330949..19332667
Molecular Weight (calculated)
40411.2 Da
IEP (calculated)
5.726
GRAVY (calculated)
-0.121
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.