Factsheet for PGSC0003DMT400051777

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g083450.2.1	Tomato	cytosol	86.25	60.0
PGSC0003DMT400051781	Potato	cytosol	91.88	40.72
PGSC0003DMT400051773	Potato	cytosol	88.12	39.61
PGSC0003DMT400051785	Potato	cytosol	80.62	35.54
PGSC0003DMT400045239	Potato	cytosol	49.38	31.35
PGSC0003DMT400038092	Potato	cytosol	56.88	26.15
PGSC0003DMT400020336	Potato	cytosol	37.5	25.21
AT1G51990.1	Thale cress	cytosol	53.75	23.69
Bra033498.1-P	Field mustard	cytosol	43.12	23.55
PGSC0003DMT400070160	Potato	cytosol	50.62	22.44
PGSC0003DMT400029318	Potato	cytosol	50.62	22.31
PGSC0003DMT400034726	Potato	cytosol	49.38	22.01
CDY54813	Canola	cytosol	49.38	21.7
Bra035482.1-P	Field mustard	cytosol	49.38	21.7
PGSC0003DMT400000736	Potato	cytosol	33.75	21.34
PGSC0003DMT400001512	Potato	cytosol	48.12	21.21
CDY52173	Canola	cytosol	46.88	20.49
CDY64795	Canola	cytosol	43.12	18.85
PGSC0003DMT400022143	Potato	cytosol	39.38	17.45
PGSC0003DMT400047988	Potato	cytosol	34.38	15.41
PGSC0003DMT400095923	Potato	cytosol	34.38	13.96
PGSC0003DMT400047989	Potato	cytosol	28.75	13.65
CDY52172	Canola	cytosol	43.12	13.09
CDX84061	Canola	cytosol	13.12	7.89
CDY64794	Canola	cytosol	9.38	7.28

Protein Annotations

Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	InterPro:IPR016461	UniProt:M1BS72
InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	EnsemblPlantsGene:PGSC0003DMG400020095	PGSC:PGSC0003DMG400020095	EnsemblPlants:PGSC0003DMT400051777
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000295C2B3
SEG:seg	:	:	:	:	:

Description

O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400020095]

Coordinates

chr6:-:58362614..58363525

Molecular Weight (calculated)

18197.3 Da

IEP (calculated)

7.430

GRAVY (calculated)

-0.094

Length

160 amino acids

Sequence
(BLAST)

001: MKRIVECYKG FQGVKEIIDV GGGLGISLAS IISKYPNIKG IEHVGGDMLK SVPQGELIIL KAILHNWDDD DCVKILKNCW RALPNDGKVV VIEQIQPEYP
101: ETNLLSKHSF TLDISMMIMF DGGKERTKQQ FEDLAKQAGF ASLKVVARAY YYWIMEFYKY

Best Arabidopsis Sequence Match ( AT1G33030.1 )
(BLAST)

001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK

Arabidopsis Description

At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.