Factsheet for PGSC0003DMT400051781

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051777	Potato	cytosol	40.72	91.88
PGSC0003DMT400051773	Potato	cytosol	89.75	91.01
PGSC0003DMT400051785	Potato	cytosol	86.98	86.5
Solyc06g083450.2.1	Tomato	cytosol	54.29	85.22
PGSC0003DMT400038092	Potato	cytosol	52.91	54.89
PGSC0003DMT400045239	Potato	cytosol	33.24	47.62
PGSC0003DMT400001512	Potato	cytosol	47.37	47.11
PGSC0003DMT400029318	Potato	cytosol	47.09	46.83
PGSC0003DMT400070160	Potato	cytosol	45.43	45.43
PGSC0003DMT400034726	Potato	cytosol	44.88	45.13
AT1G51990.1	Thale cress	cytosol	43.21	42.98
Bra035482.1-P	Field mustard	cytosol	39.89	39.56
CDY54813	Canola	cytosol	39.89	39.56
CDY52173	Canola	cytosol	39.61	39.07
Bra033498.1-P	Field mustard	cytosol	30.75	37.88
CDY64795	Canola	cytosol	38.23	37.7
PGSC0003DMT400020336	Potato	cytosol	24.65	37.4
CDY64794	Canola	cytosol	19.39	33.98
CDX84061	Canola	cytosol	24.65	33.46
PGSC0003DMT400000736	Potato	cytosol	22.44	32.02
PGSC0003DMT400022143	Potato	cytosol	31.3	31.3
PGSC0003DMT400047988	Potato	cytosol	29.92	30.25
PGSC0003DMT400047989	Potato	cytosol	27.42	29.38
PGSC0003DMT400095923	Potato	cytosol	31.02	28.43
CDY52172	Canola	cytosol	38.23	26.19

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	UniProt:M1BS73	InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	EnsemblPlantsGene:PGSC0003DMG400020096	PGSC:PGSC0003DMG400020096	EnsemblPlants:PGSC0003DMT400051781
PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases
SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI00029642A9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

Catechol O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400020096]

Coordinates

chr6:-:58357348..58359343

Molecular Weight (calculated)

40508.1 Da

IEP (calculated)

6.243

GRAVY (calculated)

-0.067

Length

361 amino acids

Sequence
(BLAST)

001: MALSMDNIVI SNEEEISMMK AMHLPCGVYL NMVLKAAIEL DLFEIIAKST TQKLSSYEIA SQIPTKNPNA SLVLERILRF LASQSFLTCN ITKNDDGNVH
101: TSYNLTPLSQ SLISNKDGTS IAPFLLLSTD PVAVNSCFHL KDAILEGEIP FNKAHGMHAF EYNGKDSRMN EVFNKAMQNI TCIEMKRIVE CYNGFKGVKE
201: IIDVGGGLGI SLASIISKYP NIKGTNFDLP FVIKDAPTYE GIEHVGGDML KSVPQGELII LKTILHNWDD DDCVKILKNC WRALPKDGKV VVIEQIQPEY
301: PETNLLSKHS FSFDISMMFI FHGGKERTKQ QFDDLAKQAG FTSLKVVARA YYSWVMEFYK Y

Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.