Factsheet for PGSC0003DMT400045239

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g060220.1.1	Tomato	cytosol	34.52	74.36
PGSC0003DMT400034726	Potato	cytosol	85.32	59.89
PGSC0003DMT400070160	Potato	cytosol	83.33	58.17
PGSC0003DMT400029318	Potato	cytosol	74.21	51.52
PGSC0003DMT400051777	Potato	cytosol	31.35	49.38
PGSC0003DMT400020336	Potato	cytosol	42.46	44.96
VIT_15s0048g02450.t01	Wine grape	cytosol	59.13	41.74
KRG97256	Soybean	cytosol	61.11	41.4
VIT_15s0048g02490.t01	Wine grape	cytosol	57.14	40.22
VIT_15s0048g02480.t01	Wine grape	cytosol	57.14	40.11
KRH47770	Soybean	cytosol	58.73	39.78
KRH47769	Soybean	cytosol	55.16	39.27
PGSC0003DMT400001512	Potato	cytosol	54.37	37.74
PGSC0003DMT400000736	Potato	cytosol	37.3	37.15
VIT_15s0048g02460.t01	Wine grape	cytosol	54.76	34.94
PGSC0003DMT400051773	Potato	cytosol	48.81	34.55
KRH47768	Soybean	cytosol	44.05	33.95
PGSC0003DMT400038092	Potato	cytosol	46.03	33.33
PGSC0003DMT400051781	Potato	cytosol	47.62	33.24
PGSC0003DMT400051785	Potato	cytosol	46.43	32.23
PGSC0003DMT400047988	Potato	cytosol	40.08	28.29
PGSC0003DMT400047989	Potato	cytosol	36.51	27.3
PGSC0003DMT400022143	Potato	cytosol	35.71	24.93
PGSC0003DMT400095923	Potato	cytosol	36.11	23.1

Protein Annotations

Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	InterPro:IPR016461	UniProt:M1BHC3
InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	EnsemblPlantsGene:PGSC0003DMG400017552	PGSC:PGSC0003DMG400017552	EnsemblPlants:PGSC0003DMT400045239
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000295C70A

Description

Caffeic acid O-methyltransferase II [Source:PGSC_GENE;Acc:PGSC0003DMG400017552]

Coordinates

chr6:+:43069275..43072696

Molecular Weight (calculated)

28027.8 Da

IEP (calculated)

5.971

GRAVY (calculated)

0.006

Length

252 amino acids

Sequence
(BLAST)

001: MFVSDNEDGA SLGPLLALLQ HKVLINTWFG LSDTVLEGGF SFERMHGVNL FEYHKTDPKL SNVFNKAMIS HTTLVMKNIL DTYKGFEDIK ALVDVGGGLG
101: INLNMITSKY PTIKGINFDL PHVVQHAPSY EGVDHVGGDM FESVPEGDAI FMKWILHDWT DSHCVKLLKN CYKSTPTKNG KVIVVEAILP VKPDPMHTSV
201: VISQTDLIML AQTTGGKERS QNDFQFLATE AGFSGINFLC CASNFWVMEF YK

Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.