Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- mitochondrion 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
PGSC0003DMT400009060 | |
PGSC0003DMT400058139 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G35160.1 | PGSC0003DMT400009060 | AT3G60820.1 | 21798944 |
AT4G35160.1 | PGSC0003DMT400058139 | AT3G60820.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400047988 | Potato | cytosol | 92.58 | 87.39 |
Solyc01g111900.2.1 | Tomato | cytosol | 90.8 | 85.71 |
PGSC0003DMT400000736 | Potato | cytosol | 44.51 | 59.29 |
VIT_03s0038g03090.t01 | Wine grape | cytosol | 59.94 | 57.22 |
PGSC0003DMT400095923 | Potato | cytosol | 66.17 | 56.6 |
VIT_03s0038g03080.t01 | Wine grape | cytosol | 59.05 | 54.37 |
KRH31595 | Soybean | cytoskeleton, cytosol, endoplasmic reticulum | 57.27 | 52.73 |
CDY09082 | Canola | cytosol | 28.19 | 47.98 |
CDX72522 | Canola | cytosol | 43.03 | 45.31 |
Bra017700.1-P | Field mustard | cytosol | 49.26 | 45.23 |
CDY67665 | Canola | cytosol | 36.8 | 44.29 |
CDY67664 | Canola | cytosol | 41.54 | 43.75 |
Bra038396.1-P | Field mustard | cytosol | 47.48 | 43.6 |
Bra034677.1-P | Field mustard | cytosol | 47.48 | 43.48 |
AT4G35160.1 | Thale cress | cytosol | 49.26 | 43.46 |
AT4G35150.1 | Thale cress | cytosol | 41.84 | 43.38 |
CDY17512 | Canola | cytosol | 45.7 | 43.38 |
Bra017699.1-P | Field mustard | cytosol | 46.88 | 43.17 |
CDX76316 | Canola | cytosol | 42.14 | 43.03 |
CDY09084 | Canola | cytosol | 43.32 | 42.94 |
PGSC0003DMT400020336 | Potato | cytosol | 30.27 | 42.86 |
CDX72521 | Canola | cytosol | 41.54 | 42.81 |
Bra034678.1-P | Field mustard | cytosol | 35.31 | 42.35 |
CDY51573 | Canola | cytosol | 47.18 | 40.46 |
CDY17514 | Canola | cytosol | 41.84 | 40.4 |
PGSC0003DMT400045239 | Potato | cytosol | 27.3 | 36.51 |
PGSC0003DMT400001512 | Potato | cytosol | 33.23 | 30.85 |
PGSC0003DMT400034726 | Potato | cytosol | 32.05 | 30.08 |
PGSC0003DMT400029318 | Potato | cytosol | 32.05 | 29.75 |
PGSC0003DMT400038092 | Potato | cytosol | 30.56 | 29.6 |
PGSC0003DMT400070160 | Potato | cytosol | 31.16 | 29.09 |
PGSC0003DMT400051777 | Potato | cytosol | 13.65 | 28.75 |
PGSC0003DMT400051781 | Potato | cytosol | 29.38 | 27.42 |
PGSC0003DMT400051785 | Potato | cytosol | 29.38 | 27.27 |
PGSC0003DMT400051773 | Potato | cytosol | 28.19 | 26.69 |
PGSC0003DMT400022143 | Potato | cytosol | 27.89 | 26.04 |
Protein Annotations
Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 |
GO:GO:0032259 | GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 | UniProt:M1BLR4 | InterPro:O-MeTrfase_COMT |
InterPro:O_MeTrfase_2 | PFAM:PF00891 | PFAM:PF08100 | EnsemblPlantsGene:PGSC0003DMG402018646 | PGSC:PGSC0003DMG402018646 | EnsemblPlants:PGSC0003DMT400047989 |
PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF98 | InterPro:Plant_MeTrfase_dimerisation | InterPro:SAM-dependent_MTases |
SUPFAM:SSF46785 | SUPFAM:SSF53335 | UniParc:UPI000294EBEB | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG402018646]
Coordinates
chr1:+:88033325..88035500
Molecular Weight (calculated)
36534.4 Da
IEP (calculated)
6.505
GRAVY (calculated)
0.117
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKETNELIQ EGESQVQADI WRCISGFTEM AVAKCAIELG ISDFLENHQE PVPLSQLSSA LGCSASSLHR ILRFLINRGI FKLVSTGNGE MGYVQTPVSR
101: LLKRDGENSM AAFVLLESSP VMLAPWHYLS ARVLSNENSG AFSAAHGKDV WEYAKTNPEH SKLINDALAC HARVTMHAII NNCAEIFKGI ESLVDVGGGN
201: GTTLGMLVKA FPWINGINFD LPHVVSVAPP CHGVVHVEGD MFHSVPKAQA AFLMCIEAIP KDTGKVIIVE AALDEKIGKE KGLKDVGLML DMMMLAHTTN
301: GKERTAKEWA HILSAAGFSR HSILQIPAIQ PVIVAYP
101: LLKRDGENSM AAFVLLESSP VMLAPWHYLS ARVLSNENSG AFSAAHGKDV WEYAKTNPEH SKLINDALAC HARVTMHAII NNCAEIFKGI ESLVDVGGGN
201: GTTLGMLVKA FPWINGINFD LPHVVSVAPP CHGVVHVEGD MFHSVPKAQA AFLMCIEAIP KDTGKVIIVE AALDEKIGKE KGLKDVGLML DMMMLAHTTN
301: GKERTAKEWA HILSAAGFSR HSILQIPAIQ PVIVAYP
001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
Arabidopsis Description
ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.