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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • mitochondrion 1
  • cytoskeleton 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400047988 Potato cytosol 92.58 87.39
Solyc01g111900.2.1 Tomato cytosol 90.8 85.71
PGSC0003DMT400000736 Potato cytosol 44.51 59.29
VIT_03s0038g03090.t01 Wine grape cytosol 59.94 57.22
PGSC0003DMT400095923 Potato cytosol 66.17 56.6
VIT_03s0038g03080.t01 Wine grape cytosol 59.05 54.37
KRH31595 Soybean cytoskeleton, cytosol, endoplasmic reticulum 57.27 52.73
CDY09082 Canola cytosol 28.19 47.98
CDX72522 Canola cytosol 43.03 45.31
Bra017700.1-P Field mustard cytosol 49.26 45.23
CDY67665 Canola cytosol 36.8 44.29
CDY67664 Canola cytosol 41.54 43.75
Bra038396.1-P Field mustard cytosol 47.48 43.6
Bra034677.1-P Field mustard cytosol 47.48 43.48
AT4G35160.1 Thale cress cytosol 49.26 43.46
AT4G35150.1 Thale cress cytosol 41.84 43.38
CDY17512 Canola cytosol 45.7 43.38
Bra017699.1-P Field mustard cytosol 46.88 43.17
CDX76316 Canola cytosol 42.14 43.03
CDY09084 Canola cytosol 43.32 42.94
PGSC0003DMT400020336 Potato cytosol 30.27 42.86
CDX72521 Canola cytosol 41.54 42.81
Bra034678.1-P Field mustard cytosol 35.31 42.35
CDY51573 Canola cytosol 47.18 40.46
CDY17514 Canola cytosol 41.84 40.4
PGSC0003DMT400045239 Potato cytosol 27.3 36.51
PGSC0003DMT400001512 Potato cytosol 33.23 30.85
PGSC0003DMT400034726 Potato cytosol 32.05 30.08
PGSC0003DMT400029318 Potato cytosol 32.05 29.75
PGSC0003DMT400038092 Potato cytosol 30.56 29.6
PGSC0003DMT400070160 Potato cytosol 31.16 29.09
PGSC0003DMT400051777 Potato cytosol 13.65 28.75
PGSC0003DMT400051781 Potato cytosol 29.38 27.42
PGSC0003DMT400051785 Potato cytosol 29.38 27.27
PGSC0003DMT400051773 Potato cytosol 28.19 26.69
PGSC0003DMT400022143 Potato cytosol 27.89 26.04
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740
GO:GO:0032259GO:GO:0046983InterPro:IPR016461InterPro:IPR036388UniProt:M1BLR4InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100EnsemblPlantsGene:PGSC0003DMG402018646PGSC:PGSC0003DMG402018646EnsemblPlants:PGSC0003DMT400047989
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF98InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI000294EBEBInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg
Description
O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG402018646]
Coordinates
chr1:+:88033325..88035500
Molecular Weight (calculated)
36534.4 Da
IEP (calculated)
6.505
GRAVY (calculated)
0.117
Length
337 amino acids
Sequence
(BLAST)
001: MAKETNELIQ EGESQVQADI WRCISGFTEM AVAKCAIELG ISDFLENHQE PVPLSQLSSA LGCSASSLHR ILRFLINRGI FKLVSTGNGE MGYVQTPVSR
101: LLKRDGENSM AAFVLLESSP VMLAPWHYLS ARVLSNENSG AFSAAHGKDV WEYAKTNPEH SKLINDALAC HARVTMHAII NNCAEIFKGI ESLVDVGGGN
201: GTTLGMLVKA FPWINGINFD LPHVVSVAPP CHGVVHVEGD MFHSVPKAQA AFLMCIEAIP KDTGKVIIVE AALDEKIGKE KGLKDVGLML DMMMLAHTTN
301: GKERTAKEWA HILSAAGFSR HSILQIPAIQ PVIVAYP
Best Arabidopsis Sequence Match ( AT4G35160.1 )
(BLAST)
001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
Arabidopsis Description
ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.