Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g084920.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G35160.1 | Solyc02g084920.2.1 | AT3G60820.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047989 | Potato | cytosol | 85.71 | 90.8 |
| PGSC0003DMT400047988 | Potato | cytosol | 90.48 | 90.48 |
| Solyc12g009110.1.1 | Tomato | cytosol | 64.15 | 62.06 |
| VIT_03s0038g03090.t01 | Wine grape | cytosol | 60.78 | 61.47 |
| VIT_03s0038g03080.t01 | Wine grape | cytosol | 59.38 | 57.92 |
| KRH31595 | Soybean | cytoskeleton, cytosol, endoplasmic reticulum | 56.58 | 55.19 |
| AT4G35150.1 | Thale cress | cytosol | 44.82 | 49.23 |
| CDX72522 | Canola | cytosol | 43.98 | 49.06 |
| Bra017700.1-P | Field mustard | cytosol | 49.86 | 48.5 |
| CDY67664 | Canola | cytosol | 43.14 | 48.12 |
| Bra038396.1-P | Field mustard | cytosol | 49.02 | 47.68 |
| CDY17512 | Canola | cytosol | 47.06 | 47.32 |
| CDX76316 | Canola | cytosol | 43.7 | 47.27 |
| CDX72521 | Canola | cytosol | 43.14 | 47.09 |
| CDY09084 | Canola | cytosol | 44.82 | 47.06 |
| Bra034677.1-P | Field mustard | cytosol | 48.46 | 47.01 |
| Bra017699.1-P | Field mustard | cytosol | 47.9 | 46.72 |
| AT4G35160.1 | Thale cress | cytosol | 49.86 | 46.6 |
| CDY09082 | Canola | cytosol | 25.77 | 46.46 |
| CDY67665 | Canola | cytosol | 35.29 | 45.0 |
| CDY17514 | Canola | cytosol | 43.98 | 44.99 |
| CDY51573 | Canola | cytosol | 48.74 | 44.27 |
| Bra034678.1-P | Field mustard | cytosol | 34.17 | 43.42 |
| Solyc06g060200.1.1 | Tomato | cytosol | 14.57 | 41.27 |
| Solyc06g060220.1.1 | Tomato | cytosol | 12.61 | 38.46 |
| Solyc06g083450.2.1 | Tomato | cytosol | 22.13 | 34.35 |
| Solyc03g080180.2.1 | Tomato | extracellular | 32.49 | 32.49 |
| Solyc10g005060.2.1 | Tomato | cytosol | 32.21 | 31.59 |
| Solyc06g007960.2.1 | Tomato | cytosol | 31.37 | 31.02 |
| Solyc10g085830.1.1 | Tomato | plastid | 28.01 | 27.7 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0008757 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019438 | GO:GO:0032259 | GO:GO:0046983 |
| InterPro:IPR016461 | InterPro:IPR036388 | UniProt:K4B452 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 |
| PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF98 | InterPro:Plant_MeTrfase_dimerisation |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | EnsemblPlantsGene:Solyc01g111900.2 | EnsemblPlants:Solyc01g111900.2.1 | UniParc:UPI00027678F5 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:-:98065509..98066925
Molecular Weight (calculated)
38716.1 Da
IEP (calculated)
6.357
GRAVY (calculated)
0.148
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKEINGLNH IGSGEEEVQA DIWRCISGFA EMAVAKCAIE LGISDFLENH QEPVPLSQLS SALGCSASSL HRILRFLINR GIFKLVSITG NGEMGYVQTP
101: VSRLLKRDGE NSMAALVLLE SSPVMLAPWH YLSARVLSKE NGGAFCAAHG KDLWEYAKIN PEHSKLINDA LACHARVTMH AIINNCAEIF KGIESLVDVG
201: GGNGTTVGML VKAFPWINGI NFDLPHVVSV APPCHGVVHV EGDMFHSVPK AHAVFLMSVL HDWGDDECIQ ILKKCIEAIP KDTGKVIIVE AVIDEKIGKG
301: KNLKDVGLML DMIMMAHTTN GKERSAKEWD HILSAAGFSS HSILQTSAIE PLILAYP
101: VSRLLKRDGE NSMAALVLLE SSPVMLAPWH YLSARVLSKE NGGAFCAAHG KDLWEYAKIN PEHSKLINDA LACHARVTMH AIINNCAEIF KGIESLVDVG
201: GGNGTTVGML VKAFPWINGI NFDLPHVVSV APPCHGVVHV EGDMFHSVPK AHAVFLMSVL HDWGDDECIQ ILKKCIEAIP KDTGKVIIVE AVIDEKIGKG
301: KNLKDVGLML DMIMMAHTTN GKERSAKEWD HILSAAGFSS HSILQTSAIE PLILAYP
001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
Arabidopsis Description
ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.