Factsheet for VIT_03s0038g03080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0146g00300.t01
VIT_15s0048g00900.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35160.1	VIT_01s0146g00300.t01	AT3G60820.1	21798944
AT4G35160.1	VIT_15s0048g00900.t01	AT3G60820.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g03090.t01	Wine grape	cytosol	74.59	77.34
PGSC0003DMT400000736	Potato	cytosol	43.44	62.85
Solyc01g111900.2.1	Tomato	cytosol	57.92	59.38
PGSC0003DMT400047989	Potato	cytosol	54.37	59.05
KRH31595	Soybean	cytoskeleton, cytosol, endoplasmic reticulum	59.02	59.02
PGSC0003DMT400047988	Potato	cytosol	57.1	58.54
Solyc12g009110.1.1	Tomato	cytosol	56.83	56.37
CDY09082	Canola	cytosol	29.23	54.04
PGSC0003DMT400095923	Potato	cytosol	57.65	53.55
CDX76316	Canola	cytosol	46.99	52.12
AT4G35150.1	Thale cress	cytosol	45.63	51.38
Bra034677.1-P	Field mustard	cytosol	51.64	51.36
CDX72522	Canola	cytosol	44.54	50.94
CDY17512	Canola	cytosol	48.91	50.42
Bra017700.1-P	Field mustard	cytosol	50.27	50.14
CDY67664	Canola	cytosol	43.72	50.0
Bra038396.1-P	Field mustard	cytosol	50.0	49.86
CDY17514	Canola	cytosol	47.54	49.86
CDX72521	Canola	cytosol	44.54	49.85
AT4G35160.1	Thale cress	cytosol	51.64	49.48
Bra017699.1-P	Field mustard	cytosol	49.18	49.18
CDY09084	Canola	cytosol	45.63	49.12
CDY51573	Canola	cytosol	50.0	46.56
Bra034678.1-P	Field mustard	cytosol	34.43	44.84
CDY67665	Canola	cytosol	33.61	43.93
VIT_12s0059g01750.t01	Wine grape	cytosol	43.99	43.87
VIT_12s0059g01790.t01	Wine grape	cytosol	42.9	42.55
VIT_08s0032g01130.t01	Wine grape	golgi	19.4	37.77
VIT_10s0003g04160.t01	Wine grape	cytosol	31.42	32.12
VIT_18s0001g02610.t01	Wine grape	cytosol	31.69	31.18
VIT_19s0135g00030.t01	Wine grape	cytosol	30.87	30.38
VIT_15s0048g02450.t01	Wine grape	cytosol	29.23	29.97
VIT_08s0007g04520.t01	Wine grape	cytosol	28.96	29.61
VIT_02s0025g02920.t01	Wine grape	cytosol	28.96	29.2
VIT_15s0048g02480.t01	Wine grape	cytosol	28.42	28.97
VIT_15s0048g02490.t01	Wine grape	cytosol	27.6	28.21
VIT_15s0048g02460.t01	Wine grape	cytosol	28.96	26.84
VIT_18s0072g00920.t01	Wine grape	cytosol	28.96	17.26
VIT_16s0098g00850.t01	Wine grape	cytosol	29.51	14.59

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100245447	wikigene:100245447	EntrezGene:100264018	wikigene:100264018	Gene3D:3.40.50.150
MapMan:50.2.1	ProteinID:AGK93045	ProteinID:AGK93045.1	ProteinID:AGN70876	ProteinID:AGN70876.1	ProteinID:AGN70877
ProteinID:AGN70877.1	ProteinID:AGN70878	ProteinID:AGN70878.1	ProteinID:AGN70879	ProteinID:AGN70879.1	ProteinID:AGN70880
ProteinID:AGN70880.1	ProteinID:CCB60582	ProteinID:CCB60582.1	ncoils:Coil	UniProt:F6I0W6	EMBL:FN596508
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0008757	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019438	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	EMBL:KC243503
EMBL:KC517475	EMBL:KC517476	EMBL:KC517477	EMBL:KC517478	EMBL:KC517479	EntrezGene:LOC100245447
wikigene:LOC100245447	EntrezGene:LOC100264018	wikigene:LOC100264018	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF98	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI0002109733	ArrayExpress:VIT_03s0038g03080	EnsemblPlantsGene:VIT_03s0038g03080
EnsemblPlants:VIT_03s0038g03080.t01	unigene:Vvi.23989	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002269814	RefSeq:XP_002269814.2
RefSeq:XP_002281110	RefSeq:XP_002281110.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:2204700..2207438

Molecular Weight (calculated)

40017.4 Da

IEP (calculated)

5.154

GRAVY (calculated)

-0.102

Length

366 amino acids

Sequence
(BLAST)

001: MNILTKDLNK ATRDMKTLEE EEEAEVGIEM WKYIYGFAEM AAVKCGIELG IADVMESHGG PITLSALSSS LGCPPSGLNR IMRFLVSRRI FKEVATSQGD
101: TGYQQTPMSR CLMTSGGDGM AAFVLLESSP VMLAPWHGLS ARVLGKGNST FEAAHGDDIW GYAAKNPDHS KLINDAMASN ARRVVPAMVN DCPEVFDGVS
201: TLVDVGGGNG TALRTLVKAC PWIRGINFDL PHVVATAPKC NDVEHVGGNM FDSVPKADAV FIMKVLHDWG DEKCIKILEK CREAIPEDKG KVVIVEAVIE
301: DGDPQGDDQK LKDVKLMVDM VMMAHTTTGK ERTFKEWDYV LLNAGFSRYT IKPIRNIVQS IIEAYP

Best Arabidopsis Sequence Match ( AT4G35160.1 )
(BLAST)

001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS

Arabidopsis Description

ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.