Factsheet for VIT_12s0059g01750.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g01790.t01	Wine grape	cytosol	88.01	87.53
PGSC0003DMT400020336	Potato	cytosol	40.6	62.6
KRH25535	Soybean	cytosol	56.4	57.02
KRH56001	Soybean	cytosol	55.31	55.01
VIT_03s0038g03080.t01	Wine grape	cytosol	43.87	43.99
VIT_08s0032g01130.t01	Wine grape	golgi	22.07	43.09
VIT_03s0038g03090.t01	Wine grape	cytosol	41.14	42.78
VIT_10s0003g04160.t01	Wine grape	cytosol	35.69	36.59
VIT_15s0048g02450.t01	Wine grape	cytosol	35.15	36.13
VIT_02s0025g02920.t01	Wine grape	cytosol	34.06	34.44
VIT_18s0001g02610.t01	Wine grape	cytosol	34.6	34.14
VIT_08s0007g04520.t01	Wine grape	cytosol	33.24	34.08
VIT_15s0048g02480.t01	Wine grape	cytosol	32.97	33.7
VIT_19s0135g00030.t01	Wine grape	cytosol	34.06	33.6
VIT_15s0048g02490.t01	Wine grape	cytosol	32.43	33.24
VIT_15s0048g02460.t01	Wine grape	cytosol	34.33	31.9
VIT_18s0072g00920.t01	Wine grape	cytosol	32.43	19.38
VIT_16s0098g00850.t01	Wine grape	cytosol	37.6	18.65

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100256875	wikigene:100256875	Gene3D:3.40.50.150	MapMan:50.2.1	ProteinID:ADJ66851
ProteinID:ADJ66851.1	ProteinID:AGN70864	ProteinID:AGN70864.1	ProteinID:AGN70865	ProteinID:AGN70865.1	ProteinID:AGN70866
ProteinID:AGN70866.1	ProteinID:AGN70867	ProteinID:AGN70867.1	ProteinID:AGN70868	ProteinID:AGN70868.1	ProteinID:AGN70869
ProteinID:AGN70869.1	ProteinID:AGN70870	ProteinID:AGN70870.1	ProteinID:CCB52011	ProteinID:CCB52011.1	UniProt:F6HIG5
EMBL:FN595765	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0019438	GO:GO:0032259	GO:GO:0046983	EMBL:GQ357168	InterPro:IPR016461
InterPro:IPR036388	EMBL:KC533535	EMBL:KC533536	EMBL:KC533537	EMBL:KC533538	EMBL:KC533539
EMBL:KC533540	EMBL:KC533541	EntrezGene:LOC100256875	wikigene:LOC100256875	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2
PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF111
InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI00015CAFE5	ArrayExpress:VIT_12s0059g01750
EnsemblPlantsGene:VIT_12s0059g01750	EnsemblPlants:VIT_12s0059g01750.t01	unigene:Vvi.23659	unigene:Vvi.25467	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
RefSeq:XP_002277476	RefSeq:XP_002277476.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:+:6622259..6623762

Molecular Weight (calculated)

40329.8 Da

IEP (calculated)

5.388

GRAVY (calculated)

0.010

Length

367 amino acids

Sequence
(BLAST)

001: MVGTSENGDV LKVSSEADET ELMLQGQANI WRHMFAFADS MALKCAVELR IADIIHSHAR PITLSQIATC IDSPSPDITC LARIMRFLVR AKIFTAAPPP
101: QSDGGETLYG LTPSSKWLLH DAELSLAPMV LMENHPSLMA PWHCFGTCVK EGGIAFEKAH GHQIWDLASE KPEFNKLFND GMACTAKISI KAVIAAYKDG
201: FGSIGTLVDV GGGTGGAVAE VVKAYPHIKG INFDLPHVVA TAPAYEGVSH VGGDMFESIP DADAIFMKWI LHDWNDEDCV KILKNCRKAI PEKTGKVIIV
301: DGVIREDGYE PFDETRLVLD LVMMAHTSHG QERTEVEWKK LLEEGGFPRY RILKIPTLQM IIEAYPV

Best Arabidopsis Sequence Match ( AT4G35160.1 )
(BLAST)

001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS

Arabidopsis Description

ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.