Factsheet for VIT_02s0025g02920.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G33030.1	Thale cress	cytosol	51.24	52.84
CDX84055	Canola	cytosol	51.79	52.81
Bra035481.1-P	Field mustard	cytosol	51.24	52.25
VIT_08s0032g01130.t01	Wine grape	golgi	27.0	52.13
VIT_15s0048g02450.t01	Wine grape	cytosol	50.96	51.82
CDY44972	Canola	cytosol	51.24	51.52
VIT_15s0048g02480.t01	Wine grape	cytosol	50.14	50.7
VIT_15s0048g02490.t01	Wine grape	cytosol	49.59	50.28
VIT_18s0001g02610.t01	Wine grape	cytosol	51.24	50.0
VIT_19s0135g00030.t01	Wine grape	cytosol	50.96	49.73
VIT_15s0048g02460.t01	Wine grape	cytosol	50.41	46.33
VIT_10s0003g04160.t01	Wine grape	cytosol	41.6	42.18
VIT_08s0007g04520.t01	Wine grape	cytosol	34.71	35.2
VIT_12s0059g01790.t01	Wine grape	cytosol	34.99	34.42
VIT_12s0059g01750.t01	Wine grape	cytosol	34.44	34.06
VIT_03s0038g03090.t01	Wine grape	cytosol	29.48	30.31
VIT_03s0038g03080.t01	Wine grape	cytosol	29.2	28.96
VIT_18s0072g00920.t01	Wine grape	cytosol	48.76	28.83
VIT_16s0098g00850.t01	Wine grape	cytosol	56.75	27.84

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100232921	wikigene:100232921	Gene3D:3.40.50.150	MapMan:50.2.1	ProteinID:AAO12872
ProteinID:AAO12872.1	EMBL:AM425674	EMBL:AY159562	ProteinID:CAN64514	ProteinID:CAN64514.1	ProteinID:CBI34618
ProteinID:CBI34618.3	EntrezGene:COMT	wikigene:COMT	UniProt:D7TVU3	EMBL:FN596251	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171
GO:GO:0008757	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019438	GO:GO:0032259
GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF81	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	TIGR:TC64352	UniParc:UPI00015CC81D	ArrayExpress:VIT_02s0025g02920
EnsemblPlantsGene:VIT_02s0025g02920	EnsemblPlants:VIT_02s0025g02920.t01	unigene:Vvi.12956	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002271830
RefSeq:XP_002271830.1	RefSeq:XP_010660322.1	:	:	:	:

Description

No Description!

Coordinates

chr2:-:2496168..2498001

Molecular Weight (calculated)

40354.8 Da

IEP (calculated)

6.450

GRAVY (calculated)

-0.084

Length

363 amino acids

Sequence
(BLAST)

001: MEKRQMVSST EEEEDSHREY AMQLVSASVL PMVLKAALEL GVLDIIGRAG PGALLSPSEI ASHIPTHNPD APFALDRILR LLASHSILTY SLDTHRDGKV
101: HRLYGLAPVA KYFVPNQDGV SLAIYLRTIQ DKVTVDIWHH LKDAVLEGGL PFKRSYGMDA IDYVGKDARF FEMLKASNRD YIPMFMNKIL ETYKGFEGLK
201: SLVDVAGGNG SVLNFIVSRY PSIKGINFDL APVIEKLPSY PGIEHVAGDM FTSVPKGDAI FMKNILHSWS DEHCVKLLRN CYHALPDNGK VIVVDAVIPD
301: APEPSAQVKS TYQLDLFMMN LNPDGKERTE KEFAELAKEA GFFSTKVAGC AYSFSLVEFH KKM

Best Arabidopsis Sequence Match ( AT1G33030.1 )
(BLAST)

001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK

Arabidopsis Description

At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.