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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035481.1-P Field mustard cytosol 96.4 97.75
CDX84055 Canola cytosol 95.01 96.35
AT1G33030.1 Thale cress cytosol 79.5 81.53
VIT_02s0025g02920.t01 Wine grape cytosol 51.52 51.24
CDY43839 Canola cytosol 45.98 45.6
CDY43052 Canola cytosol 45.71 45.33
CDY14328 Canola cytosol 45.71 45.33
CDY18306 Canola cytosol 45.71 45.33
CDY55338 Canola cytosol 36.84 44.93
CDY14330 Canola cytosol 44.6 44.48
CDY18304 Canola cytosol 25.21 44.17
CDY18302 Canola cytosol 25.21 44.17
CDX92835 Canola cytosol 44.6 43.87
CDY29856 Canola cytosol 44.6 43.87
CDY19037 Canola cytosol 44.32 43.36
CDY19039 Canola cytosol 42.11 43.18
CDY28789 Canola cytosol 41.83 41.83
CDY29477 Canola cytosol 32.69 41.12
CDX87513 Canola cytosol 40.44 40.44
CDY41780 Canola cytosol 28.53 40.23
CDX68055 Canola extracellular 37.4 39.94
CDX68056 Canola cytosol 42.11 39.9
CDX88377 Canola cytosol 41.55 39.68
CDY54913 Canola cytosol 41.55 39.37
CDY38336 Canola cytosol 40.17 38.67
CDY04598 Canola cytosol 39.89 38.61
CDX79208 Canola cytosol 40.72 38.58
CDY29475 Canola cytosol 39.61 38.34
CDY00362 Canola cytosol 39.06 38.21
CDY01335 Canola cytosol 39.06 38.21
CDX68054 Canola cytosol 39.89 38.1
CDY63947 Canola cytosol 40.17 38.06
CDY01334 Canola cytosol 38.78 37.94
CDY04597 Canola cytosol 38.78 37.63
CDY44537 Canola cytosol 39.06 37.6
CDY04600 Canola cytosol 39.06 37.6
CDX96604 Canola cytosol 27.7 37.59
CDX88317 Canola cytosol 38.5 37.57
CDX87567 Canola cytosol 38.5 37.57
CDY45380 Canola cytosol 39.34 37.57
CDX79210 Canola cytosol 39.34 37.57
CDY38339 Canola cytosol 39.61 37.53
CDX68776 Canola cytosol 30.75 37.5
CDX96602 Canola cytosol 38.78 37.43
CDY59571 Canola cytosol 39.34 37.27
CDY33669 Canola cytosol 38.5 37.17
CDY33668 Canola cytosol 38.23 37.1
CDY49883 Canola cytosol 38.78 37.04
CDX85972 Canola cytosol 37.4 36.49
CDX75190 Canola cytosol 35.18 36.39
CDY23305 Canola cytosol 36.57 36.36
CDX94511 Canola cytosol 38.23 36.22
CDY70033 Canola cytosol 22.99 36.09
CDY01333 Canola cytosol 37.4 36.0
CDY42934 Canola cytosol 38.78 35.81
CDX68085 Canola cytosol 31.86 35.17
CDY49745 Canola cytosol 33.8 35.16
CDY00364 Canola cytosol 33.52 35.07
CDY00361 Canola cytosol 37.95 34.6
CDY64795 Canola cytosol 34.35 33.88
CDY01900 Canola cytosol 36.01 33.77
CDY52173 Canola cytosol 34.07 33.61
CDY54813 Canola cytosol 33.52 33.24
CDX95399 Canola cytosol 32.13 32.31
CDX76223 Canola cytosol 23.55 31.72
CDY09082 Canola cytosol 17.17 31.31
CDX76316 Canola cytosol 26.87 29.39
CDY64794 Canola cytosol 16.62 29.13
CDY17512 Canola cytosol 28.25 28.73
CDY09084 Canola cytosol 26.87 28.53
CDY17514 Canola cytosol 27.42 28.37
CDX72521 Canola cytosol 25.21 27.83
CDX72522 Canola cytosol 24.1 27.19
CDY67665 Canola cytosol 20.5 26.43
CDX84061 Canola cytosol 19.39 26.32
CDY51573 Canola cytosol 28.53 26.21
CDY67664 Canola cytosol 22.99 25.94
CDY52172 Canola cytosol 34.35 23.53
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078I4M5UniProt:A0A078I4M5EnsemblPlants:CDY44972
ProteinID:CDY44972ProteinID:CDY44972.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00081158001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF81
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EEA79CInterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaA08g06720DBnaA08g06720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4M5]
Coordinates
chrLK032607:+:217269..218692
Molecular Weight (calculated)
39709.8 Da
IEP (calculated)
5.692
GRAVY (calculated)
0.039
Length
361 amino acids
Sequence
(BLAST)
001: MEEENLSLYA MILSSSSVLP MILKTAIDLG LFDILSESGP SSPLSASQIM SLLSTQTQTH HDSTLLNRIL RCLASYSILT CSVSTDQGAP REVYRLAPVA
101: KYFTKNRDGG GSLAPLVNLF QDKVVTDIWY DLKDSVREGG LPFNKAHGSS AAELVGRDSR FREVFQSSMK GFNEVFMDEV VNKYKGFDGV NSLVDVGGGD
201: GSILRKIISK HPHILKAINF DLSSVIKNTS SASPGIENVA GDMFTSIPKG EAIFMKVSLF ESFINSWDDE HCVKILSNCY QSLPSTGKVI VIDMVIPDFP
301: GGTLLDRSLF QFEMFMMSMN PSGKERTKKE FEVLARLAGF SSVQVPFTSL CFSVVEFYKS L
Best Arabidopsis Sequence Match ( AT1G33030.1 )
(BLAST)
001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK
Arabidopsis Description
At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.