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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04598 Canola cytosol 98.39 98.39
Bra025875.1-P Field mustard cytosol 98.12 98.12
CDY29477 Canola cytosol 72.92 94.77
CDX96602 Canola cytosol 94.1 93.85
CDY04600 Canola cytosol 93.57 93.07
CDY33669 Canola cytosol 93.03 92.78
CDY04597 Canola cytosol 91.96 92.2
CDY01335 Canola cytosol 91.15 92.14
CDY33668 Canola cytosol 91.42 91.67
CDX96604 Canola cytosol 64.88 90.98
CDY01333 Canola cytosol 91.42 90.93
CDY01334 Canola cytosol 89.81 90.79
CDY00362 Canola cytosol 89.81 90.79
CDY49745 Canola cytosol 83.65 89.91
CDY00364 Canola cytosol 82.57 89.28
CDY00361 Canola cytosol 82.57 77.78
CDX85972 Canola cytosol 72.12 72.7
CDX88317 Canola cytosol 71.31 71.89
CDX87567 Canola cytosol 71.05 71.62
CDX68085 Canola cytosol 61.13 69.72
CDX68776 Canola cytosol 45.84 57.77
CDX68056 Canola cytosol 57.91 56.69
CDX79208 Canola cytosol 56.84 55.64
CDY54913 Canola cytosol 56.57 55.38
CDY38336 Canola cytosol 54.42 54.13
CDY59571 Canola cytosol 55.23 54.07
CDY38339 Canola cytosol 55.23 54.07
CDX68055 Canola extracellular 48.79 53.85
CDY44537 Canola cytosol 53.89 53.6
CDY63947 Canola cytosol 54.69 53.54
CDY45380 Canola cytosol 53.89 53.17
CDY23305 Canola cytosol 51.47 52.89
CDY49883 Canola cytosol 53.08 52.38
CDX75190 Canola cytosol 48.79 52.15
CDX68054 Canola cytosol 52.81 52.12
CDX79210 Canola cytosol 52.28 51.59
CDX94511 Canola cytosol 52.28 51.18
CDY01900 Canola cytosol 52.81 51.17
CDY42934 Canola cytosol 52.28 49.87
CDY18302 Canola cytosol 27.35 49.51
CDY18304 Canola cytosol 27.35 49.51
CDX88377 Canola cytosol 50.13 49.47
CDX87513 Canola cytosol 47.72 49.31
CDY14330 Canola cytosol 44.24 45.58
CDY29856 Canola cytosol 44.77 45.5
CDY55338 Canola cytosol 35.66 44.93
CDX92835 Canola cytosol 43.7 44.41
CDY18306 Canola cytosol 43.16 44.23
CDY43839 Canola cytosol 43.16 44.23
CDY14328 Canola cytosol 42.9 43.96
CDY43052 Canola cytosol 42.9 43.96
CDY28789 Canola cytosol 41.02 42.38
CDY19037 Canola cytosol 41.82 42.28
CDY19039 Canola cytosol 38.87 41.19
CDX84055 Canola cytosol 38.61 40.45
CDY44972 Canola cytosol 38.34 39.61
CDY41780 Canola cytosol 27.08 39.45
VIT_10s0003g04160.t01 Wine grape cytosol 37.0 38.55
CDY52173 Canola cytosol 37.27 37.98
CDY64795 Canola cytosol 36.46 37.16
CDY54813 Canola cytosol 36.19 37.09
CDY70033 Canola cytosol 22.52 36.52
CDY64794 Canola cytosol 19.84 35.92
CDX95399 Canola cytosol 31.1 32.31
CDX84061 Canola cytosol 22.52 31.58
CDX76223 Canola cytosol 22.52 31.34
CDY09084 Canola cytosol 27.35 30.0
CDX76316 Canola cytosol 26.54 30.0
CDX72522 Canola cytosol 24.93 29.06
CDX72521 Canola cytosol 25.47 29.05
CDY17514 Canola cytosol 27.08 28.94
CDY09082 Canola cytosol 15.28 28.79
CDY17512 Canola cytosol 27.35 28.73
CDY67664 Canola cytosol 23.59 27.5
CDY51573 Canola cytosol 28.42 26.97
CDY52172 Canola cytosol 37.0 26.19
CDY67665 Canola cytosol 19.57 26.07
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078GSL0UniProt:A0A078GSL0EnsemblPlants:CDY29475
ProteinID:CDY29475ProteinID:CDY29475.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00043145001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EF312FInterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaA06g14950DBnaA06g14950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSL0]
Coordinates
chrLK032238:+:89706..92632
Molecular Weight (calculated)
40986.5 Da
IEP (calculated)
4.778
GRAVY (calculated)
0.051
Length
373 amino acids
Sequence
(BLAST)
001: MGILIEETLS ANSKSQTVID DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLCAEAAR TNSFLSPSEI ASRLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKVSSGKE ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYQGFKDV NVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVPGD MFVDVPKGDA MILKRILHDW TDEDCIKILK NCWKSLPENG
301: KVVVIELVTP DDAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAM EAGFTHCKFV CQAYHCWIIE FCK
Best Arabidopsis Sequence Match ( AT1G21130.1 )
(BLAST)
001: MGYLLEETLS SNSKTPIVID DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAEASR SDSFLSPSEI ASKLPTTPRN PEAPVLLDRM LRLLASYSVV
101: KCGKVSEGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYQGFKGV NVLVDVGGGV GNTLGVVASK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPESG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Arabidopsis Description
IGMT4Indole glucosinolate O-methyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.