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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G62900.1 Thale cress cytosol 40.78 76.59
CDY49883 Canola cytosol 72.99 74.34
CDY45380 Canola cytosol 72.99 74.34
CDX94511 Canola cytosol 73.25 74.02
CDY42934 Canola cytosol 72.73 71.61
AT1G63140.4 Thale cress cytosol 71.43 68.58
CDY54913 Canola cytosol 66.23 66.93
CDY38339 Canola cytosol 65.45 66.14
CDY63947 Canola cytosol 65.19 65.88
CDY59571 Canola cytosol 64.42 65.09
CDY23305 Canola cytosol 61.3 65.01
CDX68776 Canola cytosol 49.87 64.86
CDX68056 Canola cytosol 63.64 64.3
CDX79208 Canola cytosol 63.12 63.78
CDX75190 Canola cytosol 55.84 61.6
CDY38336 Canola cytosol 59.74 61.33
CDX68055 Canola extracellular 53.77 61.24
CDY44537 Canola cytosol 59.48 61.07
CDX68054 Canola cytosol 58.96 60.05
CDX79210 Canola cytosol 58.96 60.05
CDX88377 Canola cytosol 58.7 59.79
CDX87513 Canola cytosol 55.32 59.0
CDY29477 Canola cytosol 40.52 54.36
CDX96604 Canola cytosol 37.14 53.76
CDY01335 Canola cytosol 51.17 53.39
CDY01334 Canola cytosol 50.91 53.12
CDY00362 Canola cytosol 50.65 52.85
CDY29475 Canola cytosol 51.17 52.81
CDY04598 Canola cytosol 51.17 52.81
CDY33668 Canola cytosol 50.65 52.42
CDX96602 Canola cytosol 50.91 52.41
CDY04597 Canola cytosol 50.39 52.15
CDY33669 Canola cytosol 50.39 51.87
CDY04600 Canola cytosol 50.13 51.47
CDX85972 Canola cytosol 48.83 50.81
CDX87567 Canola cytosol 48.57 50.54
CDX88317 Canola cytosol 48.31 50.27
CDY01333 Canola cytosol 48.31 49.6
CDX68085 Canola cytosol 41.82 49.24
CDY49745 Canola cytosol 43.38 48.13
CDY00364 Canola cytosol 43.12 48.12
CDY18302 Canola cytosol 25.45 47.57
CDY18304 Canola cytosol 25.45 47.57
CDY00361 Canola cytosol 47.79 46.46
CDY43052 Canola cytosol 40.52 42.86
CDY43839 Canola cytosol 40.26 42.58
CDY18306 Canola cytosol 40.26 42.58
CDY14328 Canola cytosol 39.74 42.03
CDY14330 Canola cytosol 39.48 41.99
CDY55338 Canola cytosol 32.21 41.89
CDY19037 Canola cytosol 38.18 39.84
CDY19039 Canola cytosol 36.1 39.49
CDY28789 Canola cytosol 36.88 39.34
CDY29856 Canola cytosol 37.4 39.24
CDX92835 Canola cytosol 37.14 38.96
CDX84055 Canola cytosol 34.29 37.08
CDY41780 Canola cytosol 24.42 36.72
CDY44972 Canola cytosol 33.77 36.01
CDY64795 Canola cytosol 34.03 35.79
VIT_10s0003g04160.t01 Wine grape cytosol 33.25 35.75
CDY52173 Canola cytosol 32.47 34.15
CDY54813 Canola cytosol 30.39 32.14
CDY64794 Canola cytosol 16.62 31.07
CDY70033 Canola cytosol 18.18 30.43
CDX76223 Canola cytosol 20.52 29.48
CDY09082 Canola cytosol 15.06 29.29
CDX72521 Canola cytosol 24.16 28.44
CDX95399 Canola cytosol 26.49 28.41
CDY17512 Canola cytosol 25.71 27.89
CDX76316 Canola cytosol 23.9 27.88
CDX84061 Canola cytosol 18.96 27.44
CDY67664 Canola cytosol 22.6 27.19
CDX72522 Canola cytosol 22.34 26.88
CDY17514 Canola cytosol 23.9 26.36
CDY09084 Canola cytosol 23.12 26.18
CDY67665 Canola cytosol 18.18 25.0
CDY51573 Canola cytosol 25.19 24.68
CDY52172 Canola cytosol 33.51 24.48
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078EIK4EnsemblPlants:CDY01900ProteinID:CDY01900
ProteinID:CDY01900.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00113095001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EE2F48InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sf:
Description
BnaC06g29400D
Coordinates
chrLK031929:+:1102046..1104046
Molecular Weight (calculated)
42471.5 Da
IEP (calculated)
4.952
GRAVY (calculated)
0.128
Length
385 amino acids
Sequence
(BLAST)
001: MANYLPDSFT TSTKSSLIEE EGRLADASLQ AESLVNTMAF LMVLKSALEL GVIDTIASVE EGVWLSSSEI AFRLPTKPTN PEAPVLLERM LVLLASHSLL
101: KYRMAGAGEN GRTGKMERVY AAEPVCMFFL NRGDGSGSLA SLFMVALSEI FFKSWAHLKD VILKGEDAFT SAHGMKIFEY TASNEPFAEL FNRAMSEYST
201: LTMKKVLEVY RGFEDVNTLV DVGGGIGTII ALVTSKYTHI KGINFDIPSV LAHPPIYPGV EHVSGDMFIE IPKGDAILLK CVLHDWTNED CVRILKNCWR
301: SLSERGKVII VDMITPIKPE INDISSNIVF GMDMTMLTQS SGGQERSFSE IQGRSWIETL ASDSGFLRCE IICLANSHCV IELHK
Best Arabidopsis Sequence Match ( AT1G63140.4 )
(BLAST)
001: MNTIYTFITY LSRFSNQTTT MENHLQHSLT IIPKPDLIKE EQRYHEDTVS LQAERILHAM TFPMVLKTAL ELGVIDMITS VDDGVWLSPS EIALGLPTKP
101: TNPEAPVLLD RMLVLLASHS ILKYRTVETG DNIGSRKTER VYAAEPVCTF FLNRGDGLGS LATLFMVLQG EVCMKPWEHL KDMILEGKDA FTSAHGMRFF
201: ELIGSNEQFA EMFNRAMSEA STLIMKKVLE VYKGFEDVNT LVDVGGGIGT IIGQVTSKYP HIKGINFDLA SVLAHAPFNK GVEHVSGDMF KEIPKGDAIF
301: MKWILHDWTD EDCVKILKNY WKSLPEKGKV IIVEVVTPEE PKINDISSNI VFGMDMLMLA VSSGGKERSL SQFETLASDS GFLRCEIICH AFSYSVIELH
401: K
Arabidopsis Description
O-methyltransferase family protein [Source:TAIR;Acc:AT1G63140]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.