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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38336 Canola cytosol 98.13 98.13
AT1G77530.1 Thale cress cytosol 79.47 78.22
CDX68056 Canola cytosol 77.87 76.64
CDY63947 Canola cytosol 77.33 76.12
CDY59571 Canola cytosol 77.33 76.12
CDY54913 Canola cytosol 76.8 75.59
CDY38339 Canola cytosol 76.53 75.33
CDX79208 Canola cytosol 75.47 74.28
CDX68776 Canola cytosol 53.6 67.91
CDY49883 Canola cytosol 68.0 67.46
CDY45380 Canola cytosol 67.47 66.93
CDY23305 Canola cytosol 63.2 65.29
CDX75190 Canola cytosol 60.0 64.47
CDX68055 Canola extracellular 57.6 63.91
CDX88377 Canola cytosol 63.47 62.96
CDX87513 Canola cytosol 60.27 62.6
CDX94511 Canola cytosol 63.47 62.47
CDX68054 Canola cytosol 62.13 61.64
CDX79210 Canola cytosol 61.6 61.11
CDY42934 Canola cytosol 62.67 60.1
CDY01900 Canola cytosol 61.07 59.48
CDY29477 Canola cytosol 42.4 55.4
CDY01334 Canola cytosol 53.87 54.74
CDY00362 Canola cytosol 53.6 54.47
CDY01335 Canola cytosol 53.6 54.47
CDY04597 Canola cytosol 53.6 54.03
CDX96602 Canola cytosol 53.87 54.01
CDY29475 Canola cytosol 53.6 53.89
CDY33668 Canola cytosol 53.33 53.76
CDX96604 Canola cytosol 38.13 53.76
CDY04598 Canola cytosol 53.33 53.62
CDY33669 Canola cytosol 53.33 53.48
CDX85972 Canola cytosol 52.53 53.24
CDY04600 Canola cytosol 52.8 52.8
CDX87567 Canola cytosol 51.47 52.16
CDX88317 Canola cytosol 51.2 51.89
CDY01333 Canola cytosol 51.47 51.47
CDY18304 Canola cytosol 28.27 51.46
CDY18302 Canola cytosol 28.27 51.46
CDX68085 Canola cytosol 44.53 51.07
CDY49745 Canola cytosol 46.93 50.72
CDY00364 Canola cytosol 46.4 50.43
CDY00361 Canola cytosol 51.2 48.48
CDY14330 Canola cytosol 45.07 46.69
CDY43052 Canola cytosol 45.07 46.43
CDY18306 Canola cytosol 44.8 46.15
CDY14328 Canola cytosol 44.8 46.15
CDY43839 Canola cytosol 44.8 46.15
CDY55338 Canola cytosol 36.0 45.61
CDY29856 Canola cytosol 43.73 44.69
CDX92835 Canola cytosol 43.47 44.41
CDY19037 Canola cytosol 42.93 43.63
CDY19039 Canola cytosol 40.8 43.47
CDY28789 Canola cytosol 41.07 42.66
CDX84055 Canola cytosol 38.4 40.45
CDY44972 Canola cytosol 37.6 39.06
CDY41780 Canola cytosol 26.13 38.28
VIT_10s0003g04160.t01 Wine grape cytosol 36.53 38.27
CDY64795 Canola cytosol 34.67 35.52
CDY52173 Canola cytosol 34.67 35.52
CDY54813 Canola cytosol 33.07 34.07
CDY70033 Canola cytosol 20.53 33.48
CDY64794 Canola cytosol 17.87 32.52
CDX95399 Canola cytosol 30.13 31.48
CDX76223 Canola cytosol 22.4 31.34
CDY09082 Canola cytosol 16.27 30.81
CDX72521 Canola cytosol 26.67 30.58
CDX72522 Canola cytosol 25.87 30.31
CDX76316 Canola cytosol 26.4 30.0
CDY17512 Canola cytosol 28.27 29.86
CDY09084 Canola cytosol 26.93 29.71
CDY17514 Canola cytosol 26.67 28.65
CDX84061 Canola cytosol 20.27 28.57
CDY51573 Canola cytosol 29.6 28.24
CDY67664 Canola cytosol 24.0 28.12
CDY67665 Canola cytosol 19.73 26.43
CDY52172 Canola cytosol 35.2 25.05
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078I3E9UniProt:A0A078I3E9EnsemblPlants:CDY44537
ProteinID:CDY44537ProteinID:CDY44537.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00080328001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EE4469InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaCnng11480DBnaCnng11480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3E9]
Coordinates
chrLK032593:-:200927..202528
Molecular Weight (calculated)
41752.5 Da
IEP (calculated)
6.145
GRAVY (calculated)
-0.002
Length
375 amino acids
Sequence
(BLAST)
001: MSNHLQVPCP KPVSTKEDQE VDEKMISLHA ESILNTIAFP MVLKAALELG VIDTLAAAGN GTWKSPSEIT ANLPIKPKNP EAPNLLDRML RLLVSHSILK
101: CRVIETGGTR NTERVYAAEP VCKFFLKDSD GSGSLASLFS LCHTQVHFNT WDNLKDVILD GKDAFISAQG MPLFEYISSD QQFSEVFHRA MSESATMVMK
201: KVLEVYRGFE DVHTLVDVGG ATGTILGLIT SKHPHIKGIN FDIAQVLTNA PSYPGVEHVS GDMFVEVPKG DAVFMKWILH DWTDEHCIKL LKNCWKSLPE
301: KGKVILVEMI TPVEPKLDDF FSNIVFAMDL LMLTQCSNGK ERSLSQFQNL AFASGFLRCE VICHSYSYSV IEFHK
Best Arabidopsis Sequence Match ( AT5G53810.1 )
(BLAST)
001: MANHLQVPLT KPDRVKEEQE VEEEARLLAR RLANAAASPM VLKAALELGV IDTITTVGGG DLWLSPSEIA LRLPTKPCNL EAPALLDRML RFLVSHSVLK
101: CRTVIEENGQ TGKVERVYAA EPVCKYLLNK SDDVSGSFAS LFMLDLSDVF IKTWTHLEDV ILEGRDAFSS AHGMKLFEYI QADERFGKVF NRAMLESSTM
201: VTEKVLKFYE GFKDVKTLVD VGGGLGNTLG LITSKYPHLI GINFDLAPVL ANAHSYPGVN HVAGDMFIKI PKGDAIFMKW ILHDWTDEQC VAILKNCWKS
301: LEENGKLIIV EMVTPVEAKS GDICSNIVFG MDMTMLTQCS GGKERDLYEF ENLAYASGFS RCAIVCAVYP FSVIEIYK
Arabidopsis Description
Caffeic acid 3-O-methyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FHZ5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.