Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003707.1-P Field mustard cytosol 94.8 86.59
CDX85972 Canola cytosol 96.02 84.86
CDX88317 Canola cytosol 92.35 81.62
CDX87567 Canola cytosol 92.05 81.35
AT1G76790.1 Thale cress cytosol 78.9 70.3
CDY00364 Canola cytosol 67.28 63.77
CDY49745 Canola cytosol 67.58 63.69
CDY01334 Canola cytosol 71.87 63.69
CDY00362 Canola cytosol 71.25 63.14
CDY01335 Canola cytosol 70.95 62.87
CDY33668 Canola cytosol 70.64 62.1
CDX96602 Canola cytosol 70.34 61.5
CDY04598 Canola cytosol 69.72 61.13
CDY29475 Canola cytosol 69.72 61.13
CDY29477 Canola cytosol 53.52 60.98
CDY04600 Canola cytosol 69.72 60.8
CDY33669 Canola cytosol 69.42 60.7
CDY04597 Canola cytosol 68.81 60.48
CDX96604 Canola cytosol 48.93 60.15
CDY01333 Canola cytosol 67.58 58.93
CDY00361 Canola cytosol 63.61 52.53
CDX68776 Canola cytosol 41.59 45.95
CDX68056 Canola cytosol 53.21 45.67
CDY44537 Canola cytosol 51.07 44.53
CDY38336 Canola cytosol 51.07 44.53
CDY63947 Canola cytosol 51.38 44.09
CDX79208 Canola cytosol 51.38 44.09
CDY38339 Canola cytosol 51.07 43.83
CDY59571 Canola cytosol 51.07 43.83
CDX68055 Canola extracellular 45.26 43.79
CDY54913 Canola cytosol 50.76 43.57
CDY45380 Canola cytosol 49.54 42.86
CDX94511 Canola cytosol 49.54 42.52
CDY23305 Canola cytosol 47.09 42.42
CDX68054 Canola cytosol 48.93 42.33
CDY49883 Canola cytosol 48.93 42.33
CDX75190 Canola cytosol 44.95 42.12
CDY01900 Canola cytosol 49.24 41.82
CDX79210 Canola cytosol 48.32 41.8
CDY42934 Canola cytosol 48.93 40.92
CDX88377 Canola cytosol 47.09 40.74
CDX87513 Canola cytosol 44.04 39.89
CDY18302 Canola cytosol 24.46 38.84
CDY18304 Canola cytosol 24.46 38.84
CDY14330 Canola cytosol 41.59 37.57
CDY29856 Canola cytosol 40.06 35.69
CDY43839 Canola cytosol 39.14 35.16
CDY43052 Canola cytosol 38.84 34.89
CDY18306 Canola cytosol 38.84 34.89
CDX92835 Canola cytosol 39.14 34.88
CDY14328 Canola cytosol 38.53 34.62
VIT_10s0003g04160.t01 Wine grape cytosol 37.0 33.8
CDY19037 Canola cytosol 37.92 33.6
CDY55338 Canola cytosol 30.28 33.45
CDY19039 Canola cytosol 35.78 33.24
CDX84055 Canola cytosol 36.09 33.15
CDY28789 Canola cytosol 35.47 32.13
CDY44972 Canola cytosol 35.17 31.86
CDY54813 Canola cytosol 32.42 29.12
CDY64795 Canola cytosol 32.11 28.69
CDY52173 Canola cytosol 31.8 28.42
CDY70033 Canola cytosol 18.96 26.96
CDX95399 Canola cytosol 29.05 26.46
CDY41780 Canola cytosol 19.57 25.0
CDY64794 Canola cytosol 15.6 24.76
CDY09084 Canola cytosol 24.77 23.82
CDX76223 Canola cytosol 19.27 23.51
CDX76316 Canola cytosol 22.63 22.42
CDX72522 Canola cytosol 21.41 21.88
CDY17512 Canola cytosol 23.55 21.69
CDY51573 Canola cytosol 25.99 21.63
CDY17514 Canola cytosol 22.94 21.49
CDX84061 Canola cytosol 17.43 21.43
CDX72521 Canola cytosol 21.41 21.41
CDY67664 Canola cytosol 20.18 20.62
CDY52172 Canola cytosol 32.11 19.92
CDY09082 Canola cytosol 11.93 19.7
CDY67665 Canola cytosol 14.07 16.43
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078BTZ6EnsemblPlants:CDX68085ProteinID:CDX68085
ProteinID:CDX68085.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00099323001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EEC4CFInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sf:
Description
BnaA07g21250D
Coordinates
chrLK031787:+:3786507..3788196
Molecular Weight (calculated)
36298.7 Da
IEP (calculated)
4.467
GRAVY (calculated)
0.016
Length
327 amino acids
Sequence
(BLAST)
001: MGYVSDPKSM NEINGDDETE LGLRAVRLAN YITFPMVFKA AIELGVIDTL YAAARADVNG SSSFLKPSEI ATRLPTTPSN PEAPALLDRM LRLLASYSMV
101: KCQILDGERV YKAEPICKYF LRYNIEEMGT LASQFILELD SIFVILAQLK DVVLEGGDAF ARANGGLKLF DYMGTDERLS KLFNRTGFSG INFDLTCALT
201: QAPSYPNVEH VAGDIFVEIP RGDAIILKRM LHDWSDEDCA KILKNCWKAL PENGKVIIME LVIPDEAESA DVQSNIAFDM DLLMLTQCSG GKERSRAEYE
301: AMAANSGFAS CQFVCQAYHL WVIEFSK
Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Arabidopsis Description
IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.