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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012270.1-P Field mustard cytosol 99.73 99.47
CDY49745 Canola cytosol 89.6 96.83
CDY00364 Canola cytosol 86.93 94.49
CDX96602 Canola cytosol 91.73 91.98
CDY04598 Canola cytosol 91.2 91.69
CDY01335 Canola cytosol 90.13 91.6
CDY29475 Canola cytosol 90.93 91.42
AT1G21100.1 Thale cress cytosol 90.93 91.42
CDY33669 Canola cytosol 90.93 91.18
CDY29477 Canola cytosol 69.33 90.59
CDY04600 Canola cytosol 88.8 88.8
CDY04597 Canola cytosol 88.0 88.71
CDY33668 Canola cytosol 86.67 87.37
CDY01334 Canola cytosol 85.87 87.26
CDY00362 Canola cytosol 85.87 87.26
CDX96604 Canola cytosol 61.6 86.84
CDY00361 Canola cytosol 81.33 77.02
CDX85972 Canola cytosol 69.07 70.0
CDX88317 Canola cytosol 68.0 68.92
CDX87567 Canola cytosol 67.73 68.65
CDX68085 Canola cytosol 58.93 67.58
CDX68776 Canola cytosol 43.73 55.41
CDX68056 Canola cytosol 54.67 53.81
CDX79208 Canola cytosol 53.6 52.76
CDY54913 Canola cytosol 52.8 51.97
CDX68055 Canola extracellular 46.67 51.78
CDY38336 Canola cytosol 51.47 51.47
CDY44537 Canola cytosol 51.47 51.47
CDY23305 Canola cytosol 49.6 51.24
CDY45380 Canola cytosol 51.2 50.79
CDY59571 Canola cytosol 51.47 50.66
CDY38339 Canola cytosol 51.47 50.66
CDY49883 Canola cytosol 50.67 50.26
CDY63947 Canola cytosol 50.93 50.13
CDX94511 Canola cytosol 50.93 50.13
CDX68054 Canola cytosol 50.13 49.74
CDX75190 Canola cytosol 46.13 49.57
CDX79210 Canola cytosol 49.6 49.21
CDY42934 Canola cytosol 50.4 48.34
CDY01900 Canola cytosol 49.6 48.31
CDX88377 Canola cytosol 47.2 46.83
CDX87513 Canola cytosol 44.8 46.54
CDY18302 Canola cytosol 24.8 45.15
CDY18304 Canola cytosol 24.8 45.15
CDX92835 Canola cytosol 42.4 43.32
CDY29856 Canola cytosol 42.4 43.32
CDY14330 Canola cytosol 41.6 43.09
CDY43839 Canola cytosol 40.53 41.76
CDY55338 Canola cytosol 32.8 41.55
CDY43052 Canola cytosol 40.27 41.48
CDY18306 Canola cytosol 40.27 41.48
CDY14328 Canola cytosol 40.27 41.48
CDY28789 Canola cytosol 39.2 40.72
CDY19037 Canola cytosol 38.67 39.3
CDY19039 Canola cytosol 36.0 38.35
CDX84055 Canola cytosol 36.27 38.2
CDY41780 Canola cytosol 25.87 37.89
VIT_10s0003g04160.t01 Wine grape cytosol 35.73 37.43
CDY44972 Canola cytosol 36.0 37.4
CDY70033 Canola cytosol 22.13 36.09
CDY52173 Canola cytosol 34.93 35.79
CDY54813 Canola cytosol 34.67 35.71
CDY64794 Canola cytosol 19.47 35.44
CDY64795 Canola cytosol 33.87 34.7
CDX95399 Canola cytosol 30.4 31.75
CDX84061 Canola cytosol 21.87 30.83
CDX76223 Canola cytosol 21.87 30.6
CDY09082 Canola cytosol 14.67 27.78
CDY09084 Canola cytosol 25.07 27.65
CDX76316 Canola cytosol 24.27 27.58
CDX72521 Canola cytosol 23.47 26.91
CDX72522 Canola cytosol 22.93 26.88
CDY17514 Canola cytosol 24.8 26.65
CDY17512 Canola cytosol 24.8 26.2
CDY67664 Canola cytosol 21.6 25.31
CDY67665 Canola cytosol 18.67 25.0
CDY51573 Canola cytosol 26.13 24.94
CDY52172 Canola cytosol 34.67 24.67
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078EP94EnsemblPlants:CDY01333ProteinID:CDY01333
ProteinID:CDY01333.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259GO:GO:0046983
EnsemblPlantsGene:GSBRNA2T00112295001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891
PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EDDA98InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sf
SEG:seg:::::
Description
BnaA07g11060D
Coordinates
chrLK031926:+:352559..353879
Molecular Weight (calculated)
41205.6 Da
IEP (calculated)
4.906
GRAVY (calculated)
0.029
Length
375 amino acids
Sequence
(BLAST)
001: MGFPFEETLS SNPKTQTVID DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYADAAR TDSFLSPSDI ASRLPTTPRN PEAPVLLDRM LRLLASYAMV
101: KCNKVSSVKG ERAYRAEPIC RFFLKDKIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LDVYEGFKDV KVLVDVGGGV GNTLGVVTSK YPHIKGINFD LTCALAQAPS YPGVEHVPGD MFVDVPTGDT MILKRILHDW TDDCVNILKN CWKSLPNNGK
301: IVVIELVTPD DAENGDINAN IAFDMDMLMF TQCSGGKERS RAEFKALAAA AGFNQCKFVC QAYHCWIIEF CKEDV
Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Arabidopsis Description
IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.