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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68056 Canola cytosol 93.44 93.44
AT1G77530.1 Thale cress cytosol 80.84 80.84
CDY54913 Canola cytosol 77.17 77.17
CDY63947 Canola cytosol 77.17 77.17
CDY38336 Canola cytosol 75.07 76.27
CDY59571 Canola cytosol 75.85 75.85
CDY44537 Canola cytosol 74.28 75.47
CDY38339 Canola cytosol 75.07 75.07
CDY49883 Canola cytosol 67.45 67.99
CDY45380 Canola cytosol 67.45 67.99
CDX68776 Canola cytosol 52.23 67.23
CDY23305 Canola cytosol 64.04 67.22
CDX75190 Canola cytosol 58.27 63.61
CDX94511 Canola cytosol 63.52 63.52
CDY01900 Canola cytosol 63.78 63.12
CDX68055 Canola extracellular 55.91 63.02
CDX68054 Canola cytosol 62.2 62.7
CDX88377 Canola cytosol 61.15 61.64
CDY42934 Canola cytosol 62.99 61.38
CDX79210 Canola cytosol 60.89 61.38
CDX87513 Canola cytosol 58.01 61.22
CDY01334 Canola cytosol 55.64 57.45
CDY00362 Canola cytosol 55.38 57.18
CDY29477 Canola cytosol 43.04 57.14
CDX96602 Canola cytosol 55.91 56.95
CDY29475 Canola cytosol 55.64 56.84
CDY04597 Canola cytosol 55.38 56.72
CDY01335 Canola cytosol 54.86 56.64
CDY33669 Canola cytosol 55.38 56.42
CDY04598 Canola cytosol 55.12 56.3
CDY04600 Canola cytosol 54.59 55.47
CDY33668 Canola cytosol 53.81 55.11
CDX96604 Canola cytosol 38.32 54.89
CDY00364 Canola cytosol 48.82 53.91
CDX85972 Canola cytosol 52.23 53.78
CDY01333 Canola cytosol 52.76 53.6
CDX88317 Canola cytosol 51.97 53.51
CDX87567 Canola cytosol 51.97 53.51
CDY49745 Canola cytosol 48.56 53.31
CDY18302 Canola cytosol 28.08 51.94
CDY18304 Canola cytosol 28.08 51.94
CDX68085 Canola cytosol 44.09 51.38
CDY00361 Canola cytosol 51.44 49.49
CDY43052 Canola cytosol 44.88 46.98
CDY18306 Canola cytosol 44.88 46.98
CDY43839 Canola cytosol 44.62 46.7
CDY14328 Canola cytosol 44.62 46.7
CDY14330 Canola cytosol 44.09 46.41
CDY29856 Canola cytosol 44.36 46.05
CDY55338 Canola cytosol 35.17 45.27
CDY19039 Canola cytosol 41.47 44.89
CDY28789 Canola cytosol 42.52 44.88
CDX92835 Canola cytosol 43.04 44.69
CDY19037 Canola cytosol 42.78 44.17
CDX84055 Canola cytosol 39.11 41.85
CDY44972 Canola cytosol 38.58 40.72
CDY41780 Canola cytosol 26.77 39.84
VIT_10s0003g04160.t01 Wine grape cytosol 37.01 39.39
CDY52173 Canola cytosol 36.75 38.25
CDY64795 Canola cytosol 36.48 37.98
CDY54813 Canola cytosol 35.43 37.09
CDY64794 Canola cytosol 19.68 36.41
CDY70033 Canola cytosol 21.26 35.22
CDX76223 Canola cytosol 23.36 33.21
CDX84061 Canola cytosol 23.1 33.08
CDX95399 Canola cytosol 30.45 32.31
CDX72521 Canola cytosol 27.03 31.5
CDY09082 Canola cytosol 16.01 30.81
CDX72522 Canola cytosol 25.72 30.62
CDX76316 Canola cytosol 26.51 30.61
CDY09084 Canola cytosol 27.03 30.29
CDY17512 Canola cytosol 27.82 29.86
CDY17514 Canola cytosol 26.51 28.94
CDY67664 Canola cytosol 24.15 28.75
CDY51573 Canola cytosol 29.13 28.24
CDY67665 Canola cytosol 19.68 26.79
CDY52172 Canola cytosol 36.75 26.57
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078CVJ4EnsemblPlants:CDX79208ProteinID:CDX79208
ProteinID:CDX79208.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00131799001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EDAE1DInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg
Description
BnaC06g20950D
Coordinates
chrLK031817:+:308805..310632
Molecular Weight (calculated)
42378.6 Da
IEP (calculated)
5.448
GRAVY (calculated)
0.043
Length
381 amino acids
Sequence
(BLAST)
001: MSNHFQGPVT TNLKQVLTKE EQVADENMVS LQAESIVNTL AFPMVLKAAL ELGVIDTIAA AGNGAWLSPS EITVSLPTKP TNPEAPVLLD RMLRLLVSHS
101: MLKCRMVKSR ENGRTGKMER VYAAEPVCTY FLKDSDGSGS LASLLIMFHD QVIFKTWTKL KDVILEGRDA FSNAHGMRIF EYINVDERFG ELFHQAMSES
201: STIVMKKVLE VYRGFEGVNT LVDVGGANGT ILGLITSKYP HIKGVNFDLA QVLIDAPFYP GVKHVSGDMF KEVPSGDAVF MKWILHDWAD EHCIKILKNC
301: WKSLPEKGKM IILERITPEE PMGGDLLSDT VFAMDLLMLT QCSGGQERSL SQFENLAFES GFIRCEVICL AYSYSVIEFS K
Best Arabidopsis Sequence Match ( AT1G77520.1 )
(BLAST)
001: MTNHLQDPLP TYPKPVLTKE EQEVDEKMVS LQAESIVNTV AFPMVLKAAF ELGVIDTIAA AGNDTWLSPC EIACSLPTKP TNPEAPVLLD RMLSLLVSHS
101: ILKCRMIETG ENGRTGKIER VYAAEPVCKY FLRDSDGTGS LVPLFMLLHT QVFFKTWTNL KDVILEGRDA FNSAHGMKIF EYINSDQPFA ELFNRAMSEP
201: STMIMKKVLD VYRGFEDVNT LVDVGGGNGT VLGLVTSKYP HIKGVNFDLA QVLTQAPFYP GVEHVSGDMF VEVPKGDAVF MKWILHDWGD EDCIKILKNC
301: WKSLPEKGKI IIVEFVTPKE PKGGDLSSNT VFAMDLLMLT QCSGGKERSL SQFENLAFAS GFLRCEIICL AYSYSVIEFH K
Arabidopsis Description
O-methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9CAQ4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.