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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033498.1-P Field mustard cytosol 80.05 100.0
CDY52173 Canola cytosol 85.25 85.25
CDY64794 Canola cytosol 46.99 83.5
AT1G51990.1 Thale cress cytosol 74.86 75.48
CDY52172 Canola cytosol 96.45 66.98
CDY54813 Canola cytosol 63.93 64.29
CDX84061 Canola cytosol 42.35 58.27
CDY18302 Canola cytosol 27.6 49.03
CDY18304 Canola cytosol 27.6 49.03
CDY14330 Canola cytosol 45.36 45.86
CDY43052 Canola cytosol 44.26 44.51
CDY18306 Canola cytosol 44.26 44.51
CDY43839 Canola cytosol 43.99 44.23
CDY29856 Canola cytosol 44.26 44.14
CDY14328 Canola cytosol 43.72 43.96
PGSC0003DMT400051777 Potato cytosol 18.85 43.12
CDX92835 Canola cytosol 43.17 43.05
Solyc06g083450.2.1 Tomato cytosol 27.05 43.04
CDY19039 Canola cytosol 40.98 42.61
CDY19037 Canola cytosol 42.62 42.28
CDY28789 Canola cytosol 40.71 41.27
CDY55338 Canola cytosol 33.06 40.88
PGSC0003DMT400038092 Potato cytosol 37.98 39.94
CDY29477 Canola cytosol 30.87 39.37
CDY41780 Canola cytosol 27.32 39.06
PGSC0003DMT400051785 Potato cytosol 37.98 38.29
PGSC0003DMT400051781 Potato cytosol 37.7 38.23
PGSC0003DMT400051773 Potato cytosol 37.16 38.2
CDX68776 Canola cytosol 30.87 38.18
CDX68055 Canola extracellular 35.25 38.17
Solyc06g007960.2.1 Tomato cytosol 37.16 37.67
CDX96604 Canola cytosol 27.32 37.59
CDX68056 Canola cytosol 38.52 37.01
CDX79210 Canola cytosol 37.98 36.77
CDY01335 Canola cytosol 36.89 36.59
CDX87513 Canola cytosol 36.07 36.57
CDX68054 Canola cytosol 37.7 36.51
CDX79208 Canola cytosol 37.98 36.48
CDY29475 Canola cytosol 37.16 36.46
CDY04598 Canola cytosol 37.16 36.46
CDY23305 Canola cytosol 36.07 36.36
CDY49883 Canola cytosol 37.43 36.24
CDY45380 Canola cytosol 37.43 36.24
CDX88317 Canola cytosol 36.61 36.22
CDX87567 Canola cytosol 36.34 35.95
CDX96602 Canola cytosol 36.61 35.83
CDY54913 Canola cytosol 37.16 35.7
CDY01334 Canola cytosol 35.79 35.5
CDY00362 Canola cytosol 35.79 35.5
CDX88377 Canola cytosol 36.61 35.45
CDY38339 Canola cytosol 36.89 35.43
CDY33669 Canola cytosol 36.07 35.29
CDY04597 Canola cytosol 35.79 35.22
CDY38336 Canola cytosol 36.07 35.2
CDY59571 Canola cytosol 36.61 35.17
CDX84055 Canola cytosol 34.15 35.11
CDX75190 Canola cytosol 33.33 34.96
CDY33668 Canola cytosol 35.52 34.95
CDY63947 Canola cytosol 36.34 34.91
CDX85972 Canola cytosol 35.25 34.86
CDY44537 Canola cytosol 35.52 34.67
CDY04600 Canola cytosol 35.52 34.67
CDY44972 Canola cytosol 33.88 34.35
CDY70033 Canola cytosol 21.58 34.35
CDX94511 Canola cytosol 35.52 34.12
CDY01900 Canola cytosol 35.79 34.03
CDY01333 Canola cytosol 34.7 33.87
CDY42934 Canola cytosol 35.25 32.99
CDY00361 Canola cytosol 34.97 32.32
CDY49745 Canola cytosol 30.6 32.28
CDX68085 Canola cytosol 28.69 32.11
CDY00364 Canola cytosol 29.78 31.59
CDY09082 Canola cytosol 16.94 31.31
CDX95399 Canola cytosol 29.23 29.8
CDX76223 Canola cytosol 21.58 29.48
CDY17512 Canola cytosol 27.87 28.73
CDX76316 Canola cytosol 25.41 28.18
CDX72521 Canola cytosol 24.86 27.83
CDX72522 Canola cytosol 24.32 27.81
CDY67664 Canola cytosol 23.5 26.88
CDY09084 Canola cytosol 24.86 26.76
CDY17514 Canola cytosol 25.14 26.36
CDY51573 Canola cytosol 27.87 25.95
CDY67665 Canola cytosol 19.4 25.36
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078JEE7UniProt:A0A078JEE7EnsemblPlants:CDY64795
ProteinID:CDY64795ProteinID:CDY64795.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00042748001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF114
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EE72EEInterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf:::::
Description
BnaA01g35470DBnaA01g35470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEE7]
Coordinates
chrLK034552:-:20963..22990
Molecular Weight (calculated)
40767.3 Da
IEP (calculated)
5.797
GRAVY (calculated)
-0.118
Length
366 amino acids
Sequence
(BLAST)
001: MNSLQKSGGS SNEEEDMLLA MQLCGIELIA YCVKTARELD LLEIMARARP LGIHLSTLYL ASKAAPNNPD APVMIDRLLR LLVAYSVCTC KLVKDETGRE
101: SRTYGLGNVG KKFIKDEHGI SIAPYVLFHC SHTKGVTWSY LTESILEGGA SAWEKASGAL VFEYMKENES LKEDFNESMM SHTTIVMNKI LENYNGFESL
201: RDSTLVDVGG GIGTNLAQAL SKFPHLKGIN FDLPHIVSEA PQIHGVEHIG GDMFDEIPRG QAILMKWILH DWSDEKCVEI LRNCKKAIPE TGRVIVIETI
301: VPREVNNTDI ATKNALHSDV GMMCLTRGGR ERTKEEFEVL AMKGGFKLPN FIYGAYSFWV LELYPN
Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)
001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
Arabidopsis Description
F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.