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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96604 Canola cytosol 84.67 91.35
Bra025874.1-P Field mustard cytosol 98.61 76.08
CDY04597 Canola cytosol 98.61 76.08
CDY01335 Canola cytosol 94.43 73.44
CDY04600 Canola cytosol 95.47 73.07
CDY29475 Canola cytosol 94.77 72.92
CDY04598 Canola cytosol 94.77 72.92
CDX96602 Canola cytosol 94.77 72.73
CDY01334 Canola cytosol 93.38 72.63
CDY00362 Canola cytosol 93.38 72.63
CDY33669 Canola cytosol 94.08 72.19
CDY33668 Canola cytosol 92.33 71.24
CDY01333 Canola cytosol 90.59 69.33
CDY49745 Canola cytosol 81.53 67.44
CDY00364 Canola cytosol 79.44 66.09
CDY00361 Canola cytosol 84.32 61.11
CDX85972 Canola cytosol 75.26 58.38
CDX88317 Canola cytosol 74.56 57.84
CDX87567 Canola cytosol 74.22 57.57
CDX68085 Canola cytosol 60.98 53.52
CDY18302 Canola cytosol 35.54 49.51
CDY18304 Canola cytosol 35.54 49.51
CDX68776 Canola cytosol 49.83 48.31
CDX75190 Canola cytosol 56.79 46.7
CDX68056 Canola cytosol 58.88 44.36
CDY54913 Canola cytosol 58.54 44.09
CDY23305 Canola cytosol 55.4 43.8
CDX68055 Canola extracellular 51.22 43.49
CDX79208 Canola cytosol 57.14 43.04
CDY38336 Canola cytosol 56.1 42.93
CDY59571 Canola cytosol 56.45 42.52
CDY38339 Canola cytosol 56.45 42.52
CDY44537 Canola cytosol 55.4 42.4
CDY45380 Canola cytosol 55.4 42.06
CDY63947 Canola cytosol 55.75 41.99
CDX87513 Canola cytosol 52.61 41.83
CDX94511 Canola cytosol 55.05 41.47
CDY49883 Canola cytosol 54.36 41.27
CDX68054 Canola cytosol 54.01 41.01
CDY01900 Canola cytosol 54.36 40.52
CDX79210 Canola cytosol 53.31 40.48
CDY42934 Canola cytosol 54.01 39.64
CDX88377 Canola cytosol 50.87 38.62
CDY14330 Canola cytosol 46.69 37.02
CDY29856 Canola cytosol 46.34 36.24
CDY70033 Canola cytosol 28.92 36.09
CDX92835 Canola cytosol 45.64 35.69
CDY18306 Canola cytosol 44.6 35.16
CDY43839 Canola cytosol 44.25 34.89
CDY14328 Canola cytosol 43.9 34.62
CDY43052 Canola cytosol 43.9 34.62
CDY28789 Canola cytosol 43.21 34.35
CDX84055 Canola cytosol 41.46 33.43
CDY55338 Canola cytosol 34.15 33.11
CDY19037 Canola cytosol 42.16 32.79
CDY44972 Canola cytosol 41.12 32.69
CDY19039 Canola cytosol 40.07 32.67
CDY52173 Canola cytosol 40.07 31.42
VIT_10s0003g04160.t01 Wine grape cytosol 39.02 31.28
CDY64795 Canola cytosol 39.37 30.87
CDY54813 Canola cytosol 39.02 30.77
CDY09082 Canola cytosol 19.16 27.78
CDY41780 Canola cytosol 24.74 27.73
CDY64794 Canola cytosol 19.16 26.7
CDX95399 Canola cytosol 32.4 25.91
CDX76316 Canola cytosol 29.27 25.45
CDY09084 Canola cytosol 29.62 25.0
CDX72522 Canola cytosol 27.53 24.69
CDY17514 Canola cytosol 29.97 24.64
CDY17512 Canola cytosol 30.31 24.51
CDX72521 Canola cytosol 27.87 24.46
CDY67664 Canola cytosol 26.13 23.44
CDX84061 Canola cytosol 21.25 22.93
CDX76223 Canola cytosol 21.25 22.76
CDY51573 Canola cytosol 31.01 22.65
CDY52172 Canola cytosol 41.12 22.39
CDY67665 Canola cytosol 21.6 22.14
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078GWF3UniProt:A0A078GWF3EnsemblPlants:CDY29477
ProteinID:CDY29477ProteinID:CDY29477.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00043148001InterPro:IPR016461
InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFscan:PS51683PANTHER:PTHR11746
PANTHER:PTHR11746:SF118InterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EDB47CInterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaA06g14930DBnaA06g14930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWF3]
Coordinates
chrLK032238:+:96957..98107
Molecular Weight (calculated)
31573.1 Da
IEP (calculated)
5.381
GRAVY (calculated)
0.037
Length
287 amino acids
Sequence
(BLAST)
001: MLRLLASYSM VKCGTVQAGK GERVYRAEPI CRFFLKDNIQ DIGSLASQVI VNFDSVFLST WGQLKDVVLE GGDAFGRAHG GMKLFDHMGT DERFSKLFNQ
101: TGFTIAVVKK ALEVYQGFKD VNVLVDVGGG VGNTLGVVTS KYPNIKGINF DLTCALAQAP SYPGVEHVPG DMFVDVPKGD AMILKRILHD WTDEDCVKIL
201: KNCWKSLPEN GKVVVIELVT PDDAENGDIN ANIAFDMDML MFTQCSGGKE RSRAEFEALA AASGFTHCKF VCPAYHCWII EFCKENV
Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Arabidopsis Description
IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.