Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72522 | Canola | cytosol | 74.71 | 79.38 |
| CDX76316 | Canola | cytosol | 76.76 | 79.09 |
| CDY67664 | Canola | cytosol | 73.82 | 78.44 |
| CDX72521 | Canola | cytosol | 75.29 | 78.29 |
| CDY51573 | Canola | cytosol | 87.65 | 75.83 |
| CDY17514 | Canola | cytosol | 77.06 | 75.07 |
| CDY09082 | Canola | cytosol | 43.24 | 74.24 |
| CDY17512 | Canola | cytosol | 75.0 | 71.83 |
| CDY67665 | Canola | cytosol | 55.29 | 67.14 |
| VIT_03s0038g03090.t01 | Wine grape | cytosol | 50.59 | 48.73 |
| PGSC0003DMT400000736 | Potato | cytosol | 35.59 | 47.83 |
| VIT_03s0038g03080.t01 | Wine grape | cytosol | 49.12 | 45.63 |
| Solyc01g111900.2.1 | Tomato | cytosol | 47.06 | 44.82 |
| KRH31595 | Soybean | cytoskeleton, cytosol, endoplasmic reticulum | 47.94 | 44.54 |
| Solyc12g009110.1.1 | Tomato | cytosol | 48.24 | 44.44 |
| PGSC0003DMT400047988 | Potato | cytosol | 46.18 | 43.98 |
| PGSC0003DMT400047989 | Potato | cytosol | 42.94 | 43.32 |
| PGSC0003DMT400095923 | Potato | cytosol | 47.65 | 41.12 |
| CDY18304 | Canola | cytosol | 21.47 | 35.44 |
| CDY18302 | Canola | cytosol | 21.47 | 35.44 |
| CDY70033 | Canola | cytosol | 20.29 | 30.0 |
| CDY19039 | Canola | cytosol | 30.88 | 29.83 |
| CDY29477 | Canola | cytosol | 25.0 | 29.62 |
| CDY19037 | Canola | cytosol | 32.06 | 29.54 |
| CDX68776 | Canola | cytosol | 25.59 | 29.39 |
| CDY14330 | Canola | cytosol | 30.59 | 28.73 |
| CDX68055 | Canola | extracellular | 28.24 | 28.4 |
| CDY55338 | Canola | cytosol | 24.71 | 28.38 |
| CDY43839 | Canola | cytosol | 30.29 | 28.3 |
| CDY14328 | Canola | cytosol | 30.29 | 28.3 |
| CDY43052 | Canola | cytosol | 30.0 | 28.02 |
| CDY18306 | Canola | cytosol | 29.71 | 27.75 |
| CDX68056 | Canola | cytosol | 30.88 | 27.56 |
| CDY29475 | Canola | cytosol | 30.0 | 27.35 |
| CDX84055 | Canola | cytosol | 28.53 | 27.25 |
| CDY38336 | Canola | cytosol | 30.0 | 27.2 |
| CDY00362 | Canola | cytosol | 29.41 | 27.1 |
| CDY01334 | Canola | cytosol | 29.41 | 27.1 |
| CDY04598 | Canola | cytosol | 29.71 | 27.08 |
| CDX79208 | Canola | cytosol | 30.29 | 27.03 |
| CDY45380 | Canola | cytosol | 30.0 | 26.98 |
| CDY44537 | Canola | cytosol | 29.71 | 26.93 |
| CDY54813 | Canola | cytosol | 28.82 | 26.92 |
| CDY04597 | Canola | cytosol | 29.41 | 26.88 |
| CDY44972 | Canola | cytosol | 28.53 | 26.87 |
| CDX88317 | Canola | cytosol | 29.12 | 26.76 |
| CDX87567 | Canola | cytosol | 29.12 | 26.76 |
| CDY49883 | Canola | cytosol | 29.71 | 26.72 |
| CDY29856 | Canola | cytosol | 28.82 | 26.7 |
| CDX75190 | Canola | cytosol | 27.35 | 26.65 |
| CDY33668 | Canola | cytosol | 29.12 | 26.61 |
| CDX96602 | Canola | cytosol | 29.12 | 26.47 |
| CDY23305 | Canola | cytosol | 28.24 | 26.45 |
| CDX92835 | Canola | cytosol | 28.53 | 26.43 |
| CDX96604 | Canola | cytosol | 20.59 | 26.32 |
| CDY01335 | Canola | cytosol | 28.53 | 26.29 |
| CDX94511 | Canola | cytosol | 29.41 | 26.25 |
| CDX85972 | Canola | cytosol | 28.53 | 26.22 |
| CDY54913 | Canola | cytosol | 29.12 | 25.98 |
| CDY59571 | Canola | cytosol | 29.12 | 25.98 |
| CDY04600 | Canola | cytosol | 28.53 | 25.87 |
| CDY38339 | Canola | cytosol | 28.82 | 25.72 |
| CDX95399 | Canola | cytosol | 27.06 | 25.63 |
| CDY63947 | Canola | cytosol | 28.53 | 25.46 |
| CDY52173 | Canola | cytosol | 27.35 | 25.41 |
| CDY33669 | Canola | cytosol | 27.94 | 25.4 |
| CDX87513 | Canola | cytosol | 26.76 | 25.21 |
| CDY01333 | Canola | cytosol | 27.65 | 25.07 |
| CDY42934 | Canola | cytosol | 28.82 | 25.06 |
| CDY28789 | Canola | cytosol | 26.47 | 24.93 |
| CDY64795 | Canola | cytosol | 26.76 | 24.86 |
| CDX68085 | Canola | cytosol | 23.82 | 24.77 |
| CDX88377 | Canola | cytosol | 27.35 | 24.6 |
| CDY00361 | Canola | cytosol | 28.53 | 24.49 |
| CDX68054 | Canola | cytosol | 26.76 | 24.07 |
| CDY49745 | Canola | cytosol | 24.12 | 23.63 |
| CDX79210 | Canola | cytosol | 26.18 | 23.55 |
| CDX76223 | Canola | cytosol | 18.53 | 23.51 |
| CDY00364 | Canola | cytosol | 23.53 | 23.19 |
| CDY01900 | Canola | cytosol | 26.18 | 23.12 |
| CDX84061 | Canola | cytosol | 15.0 | 19.17 |
| CDY41780 | Canola | cytosol | 14.12 | 18.75 |
| CDY64794 | Canola | cytosol | 11.18 | 18.45 |
| CDY52172 | Canola | cytosol | 27.06 | 17.46 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:A0A078F7S0 | UniProt:A0A078F7S0 | EnsemblPlants:CDY09084 |
| ProteinID:CDY09084 | ProteinID:CDY09084.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 | GO:GO:0032259 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00001291001 | InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 |
| PFAM:PF00891 | PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF98 |
| InterPro:Plant_MeTrfase_dimerisation | InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | UniParc:UPI0004EF3F7F | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaC08g10380DBnaC08g10380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7S0]
Coordinates
chrLK031992:+:893782..897539
Molecular Weight (calculated)
37713.7 Da
IEP (calculated)
6.250
GRAVY (calculated)
-0.126
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENKRNLLD EEAKASLDIW RYLFGFADMA AAKCAIDLKV PEALENHPSS RPMTLAELSS ATSASPSHLH RIMRFLVYQG VFKEVSTKDG LATGYTNTPL
101: SRRMMITKLV SSPVNGPVPP FDAVHGKDLW SFAKDHPRHS ELLNEAMACD ARRVVPRVAG ACQGLFDGVA TVVDVGGGTG ETIGILVKEF PGIKGINFDL
201: PHVVEVVQAM DNVDNVGGDM FDSIPSCDAV FIKWVLHDWG DKDCIKILKN CKKALPPKTG KVLIVESVVG EKKKTMIMEE RDEKLEYVKL ALDMVMMVHT
301: STGKERTLKE WDFVIKEAGF ARYEVRDIDD VQSVIIAYRS
101: SRRMMITKLV SSPVNGPVPP FDAVHGKDLW SFAKDHPRHS ELLNEAMACD ARRVVPRVAG ACQGLFDGVA TVVDVGGGTG ETIGILVKEF PGIKGINFDL
201: PHVVEVVQAM DNVDNVGGDM FDSIPSCDAV FIKWVLHDWG DKDCIKILKN CKKALPPKTG KVLIVESVVG EKKKTMIMEE RDEKLEYVKL ALDMVMMVHT
301: STGKERTLKE WDFVIKEAGF ARYEVRDIDD VQSVIIAYRS
001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
Arabidopsis Description
ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.