Factsheet for VIT_03s0038g03090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0146g00300.t01
VIT_15s0048g00900.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35160.1	VIT_01s0146g00300.t01	AT3G60820.1	21798944
AT4G35160.1	VIT_15s0048g00900.t01	AT3G60820.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g03080.t01	Wine grape	cytosol	77.34	74.59
PGSC0003DMT400000736	Potato	cytosol	47.88	66.8
Solyc12g009110.1.1	Tomato	cytosol	65.16	62.33
KRH31595	Soybean	cytoskeleton, cytosol, endoplasmic reticulum	63.74	61.48
Solyc01g111900.2.1	Tomato	cytosol	61.47	60.78
PGSC0003DMT400047988	Potato	cytosol	60.91	60.22
PGSC0003DMT400047989	Potato	cytosol	57.22	59.94
PGSC0003DMT400095923	Potato	cytosol	64.31	57.61
CDX76316	Canola	cytosol	49.58	53.03
Bra034677.1-P	Field mustard	cytosol	54.11	51.9
AT4G35150.1	Thale cress	cytosol	47.59	51.69
CDX72522	Canola	cytosol	46.74	51.56
CDY17512	Canola	cytosol	51.56	51.27
CDY09082	Canola	cytosol	28.61	51.01
CDY67664	Canola	cytosol	46.18	50.94
AT4G35160.1	Thale cress	cytosol	54.96	50.79
CDX72521	Canola	cytosol	47.03	50.76
CDY09084	Canola	cytosol	48.73	50.59
CDY17514	Canola	cytosol	49.86	50.43
Bra038396.1-P	Field mustard	cytosol	52.41	50.41
Bra017700.1-P	Field mustard	cytosol	52.41	50.41
Bra017699.1-P	Field mustard	cytosol	50.71	48.91
CDY51573	Canola	cytosol	52.41	47.07
Bra034678.1-P	Field mustard	cytosol	35.41	44.48
CDY67665	Canola	cytosol	34.28	43.21
VIT_12s0059g01750.t01	Wine grape	cytosol	42.78	41.14
VIT_12s0059g01790.t01	Wine grape	cytosol	42.21	40.38
VIT_08s0032g01130.t01	Wine grape	golgi	20.68	38.83
VIT_10s0003g04160.t01	Wine grape	cytosol	31.44	31.01
VIT_18s0001g02610.t01	Wine grape	cytosol	32.58	30.91
VIT_15s0048g02450.t01	Wine grape	cytosol	30.88	30.53
VIT_15s0048g02480.t01	Wine grape	cytosol	30.88	30.36
VIT_19s0135g00030.t01	Wine grape	cytosol	31.73	30.11
VIT_15s0048g02490.t01	Wine grape	cytosol	30.31	29.89
VIT_02s0025g02920.t01	Wine grape	cytosol	30.31	29.48
VIT_08s0007g04520.t01	Wine grape	cytosol	29.18	28.77
VIT_15s0048g02460.t01	Wine grape	cytosol	29.75	26.58
VIT_18s0072g00920.t01	Wine grape	cytosol	28.61	16.45
VIT_16s0098g00850.t01	Wine grape	cytosol	32.01	15.27

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100258846	wikigene:100258846	Gene3D:3.40.50.150	MapMan:50.2.1	ProteinID:AGK93042
ProteinID:AGK93042.1	ProteinID:AGK93043	ProteinID:AGK93043.1	ProteinID:AGK93044	ProteinID:AGK93044.1	ProteinID:AGN70871
ProteinID:AGN70871.1	ProteinID:AGN70872	ProteinID:AGN70872.1	ProteinID:AGN70873	ProteinID:AGN70873.1	ProteinID:AGN70874
ProteinID:AGN70874.1	ProteinID:AGN70875	ProteinID:AGN70875.1	ProteinID:CCB60581	ProteinID:CCB60581.1	UniProt:F6I0W5
EMBL:FN596508	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0019438	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388
EMBL:KC243500	EMBL:KC243501	EMBL:KC243502	EMBL:KC517470	EMBL:KC517471	EMBL:KC517472
EMBL:KC517473	EMBL:KC517474	EntrezGene:LOC100258846	wikigene:LOC100258846	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2
PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF98
InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	TIGR:TC66289	UniParc:UPI00015C869B
ArrayExpress:VIT_03s0038g03090	EnsemblPlantsGene:VIT_03s0038g03090	EnsemblPlants:VIT_03s0038g03090.t01	unigene:Vvi.17261	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
RefSeq:XP_002281120	RefSeq:XP_002281120.1	SEG:seg	:	:	:

Description

O-methyltransferase OMT3 [Source:UniProtKB/TrEMBL;Acc:F6I0W5]

Coordinates

chr3:-:2208415..2209787

Molecular Weight (calculated)

38597.8 Da

IEP (calculated)

5.892

GRAVY (calculated)

-0.018

Length

353 amino acids

Sequence
(BLAST)

001: MEKVVKIMEK EEAEAEVEMW KYIFGFVEMA VVKCGIELGI ADVIESHAGP ITLSSLSSSL GCSPSGLYRI MRFLVNRRIF KEVATSQGDT GYQQTPLSRR
101: LMTRSENGMA ALLLLESSPV MLAPWHGLSA RLLGKGNATF DAAHGQDVWG YAASHPAHSK LINDAMACDA RMAVSAIVNG CPEVFDGVST LVDVGGGDGT
201: ALRTLIKARP LIRGINFDLP HVVSSAPKCN GVEYASGDMF DTVPKADAAF LMWVLHDWGD EECIQILEKC RQAIPGDKGK VIIVEAVIQE NEKEGDNNLK
301: DVGLMLDMVM MAHTTTGKER TLKEWDYVLK KAGFNRYTVK PIRAVKSVIE AYP

Best Arabidopsis Sequence Match ( AT4G35160.1 )
(BLAST)

001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS

Arabidopsis Description

ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.