Factsheet for VIT_18s0072g00920.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0032g01130.t01	Wine grape	golgi	15.64	51.06
KRG91815	Soybean	cytosol	29.48	50.28
KRH40859	Soybean	cytosol	28.99	49.86
VIT_19s0135g00030.t01	Wine grape	cytosol	29.97	49.46
VIT_18s0001g02610.t01	Wine grape	cytosol	29.8	49.19
KRH29977	Soybean	cytosol	29.32	49.18
VIT_02s0025g02920.t01	Wine grape	cytosol	28.83	48.76
KRH34966	Soybean	cytosol	29.15	48.51
KRH01239	Soybean	cytosol	29.8	48.41
KRG89137	Soybean	cytosol	29.15	48.38
KRH40858	Soybean	endoplasmic reticulum	28.66	47.7
VIT_15s0048g02450.t01	Wine grape	cytosol	27.04	46.5
VIT_15s0048g02480.t01	Wine grape	cytosol	26.55	45.4
KRG89138	Soybean	golgi	13.52	45.36
VIT_15s0048g02490.t01	Wine grape	cytosol	26.22	44.97
VIT_15s0048g02460.t01	Wine grape	cytosol	26.55	41.27
VIT_10s0003g04160.t01	Wine grape	cytosol	22.8	39.11
VIT_08s0007g04520.t01	Wine grape	cytosol	19.06	32.68
VIT_12s0059g01750.t01	Wine grape	cytosol	19.38	32.43
VIT_12s0059g01790.t01	Wine grape	cytosol	19.06	31.71
VIT_03s0038g03080.t01	Wine grape	cytosol	17.26	28.96
VIT_03s0038g03090.t01	Wine grape	cytosol	16.45	28.61
VIT_16s0098g00850.t01	Wine grape	cytosol	32.57	27.03

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100260649	wikigene:100260649	Gene3D:3.40.50.150	MapMan:50.2.1	ProteinID:CBI18183
ProteinID:CBI18183.3	UniProt:D7SRA2	EMBL:FN594968	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019438	GO:GO:0032259	GO:GO:0046983
InterPro:IPR016461	InterPro:IPR036388	EntrezGene:LOC100260649	wikigene:LOC100260649	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2
PFAM:PF00891	PFAM:PF08100	PFscan:PS51683	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785
SUPFAM:SSF53335	TIGR:TC62584	UniParc:UPI0001BE158F	ArrayExpress:VIT_18s0072g00920	EnsemblPlantsGene:VIT_18s0072g00920	EnsemblPlants:VIT_18s0072g00920.t01
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002270704	RefSeq:XP_002270704.2	:	:

Description

No Description!

Coordinates

chr18:+:20311706..20316217

Molecular Weight (calculated)

67962.2 Da

IEP (calculated)

6.241

GRAVY (calculated)

-0.065

Length

614 amino acids

Sequence
(BLAST)

001: MSLKKDEAYR WMSEEDESCI QAMLFASSHV FPTILNTAVE LNLFEIIARA GPGAYVSPSE IASQLPTQNP NAPCFMDRML RLFASHGLLS YSLRTLEDGR
101: VDRLYGLTPV CKFFLRSDDG SCLASLSTLG SHRAMREVWP HLKDAILKGG NQFQKVHGMS MFEYMDKDPT LNKAFNEAMV GRSTIIMKKI VETYQGFEGL
201: ASLVDVGGGT GANLNMIISK YPSIKGINFD LPHVVQTAPT YPERGILEQQ SMSLKKDEAY RWMSEEDESC IQAMLFASSH VFPTILNTAV ELNLFEIIAR
301: AGPGAYVSPS EIASQLPTQN PNAPCFMDRM LRLFASHGLL SYSLRTLEDG RVDRLYGLTP VCKFFLRSDD GSCLASLSTV GSHRALREVW PSLKDAILEG
401: GDQFQKVHGM SMFEYMDKDP TLNKAFNEAM VGRSTIIMKK VVETYQGFEG LASLVDVGGG TGATLNMIIS KYPSIKGINF DLPHVVQTAP TYPGIEHVGG
501: SMLVSIPKAD AIMIKDTCHN WSDEHCLKFL RNCYESLPKN GKVIVIDIIM PEAPEPSIGS QYVARLDNVM LLLHGGKERT AREFEALCKG SGFSDFRVAC
601: CVYSCLSAVM EFQK

Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.