CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
plastid 2
endoplasmic reticulum 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89138	Soybean	golgi	38.75	78.14
KRG89137	Soybean	cytosol	71.54	71.35
KRH40859	Soybean	cytosol	68.02	70.31
KRG91815	Soybean	cytosol	53.93	55.28
KRH34966	Soybean	cytosol	53.66	53.66
KRH01239	Soybean	cytosol	50.95	49.74
KRH29977	Soybean	cytosol	49.05	49.45
KRH64288	Soybean	cytosol, nucleus	41.19	41.64
KRH53640	Soybean	cytosol	41.19	41.64
KRH14071	Soybean	cytosol	23.04	41.26
KRH64289	Soybean	cytosol	36.86	40.84
KRH53639	Soybean	cytosol	40.38	40.71
KRH53638	Soybean	mitochondrion	40.11	40.55
KRH47769	Soybean	cytosol	38.75	40.4
KRH47768	Soybean	cytosol	34.42	38.84
KRH47770	Soybean	cytosol	39.02	38.71
KRG97256	Soybean	cytosol	38.21	37.9
KRH21852	Soybean	cytosol, nucleus	33.33	34.65
KRH13467	Soybean	cytosol	33.06	34.27
VIT_18s0072g00920.t01	Wine grape	cytosol	47.7	28.66
KRH31595	Soybean	cytoskeleton, cytosol, endoplasmic reticulum	25.47	25.68
KRH56001	Soybean	cytosol	25.47	25.47
KRH25535	Soybean	cytosol	24.93	25.34

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:106794104	Gene3D:3.40.50.150	MapMan:50.2.1	UniProt:A0A0R0IEJ6	EMBL:ACUP02006067
EnsemblPlantsGene:GLYMA_09G281800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	GO:GO:0046983
InterPro:IPR016461	InterPro:IPR036388	EnsemblPlants:KRH40858	ProteinID:KRH40858	ProteinID:KRH40858.1	InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746
PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI000189DA07
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:49738458..49740379

Molecular Weight (calculated)

41027.1 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.146

Length

369 amino acids

Sequence
(BLAST)

001: MSSNSRESQV HPEIAKVEDP YLSAVLLCFS RVLPAVLNAA IDLNLFDIIA KAQSSCDSSF SASEIASLLP NQHPQLANRL ERILPLLASY SLLNCSIRTN
101: EDGKRERVYA LSPVGAYFAF DKDEGSSLAP LSSLIHRGFH DMWKDVKDAI VDPNNNNHFE NVHGIPPYDY MEKNAELNDI FYKAVIHAAP LELKRALKLY
201: KGFEGVSTLV DVGGGAGETL KQILPKYPSM KGINFDLPLV IQKAPPHPGI EQIAGDMFES VPTGDAILVK FVCHNWADED CIKFLRNFHK ALPQHGKVIV
301: FEYIIPEVPN PSYISKHTCT LDNVMFLAHG GRERTQKEFE NLCKSSGFSK FHVASSDISS TLGVMEFYK

Best Arabidopsis Sequence Match ( AT1G33030.1 )
(BLAST)

001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK

Arabidopsis Description

At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.