CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
plastid 2
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40858	Soybean	endoplasmic reticulum	78.14	38.75
KRH14071	Soybean	cytosol	39.89	35.44
KRH40859	Soybean	cytosol	60.11	30.81
KRG89137	Soybean	cytosol	61.2	30.27
KRG91815	Soybean	cytosol	52.46	26.67
KRH34966	Soybean	cytosol	52.46	26.02
KRH29977	Soybean	cytosol	49.73	24.86
KRH01239	Soybean	cytosol	48.09	23.28
KRH47768	Soybean	cytosol	39.34	22.02
KRH64289	Soybean	cytosol	39.89	21.92
KRH47769	Soybean	cytosol	42.08	21.75
KRH64288	Soybean	cytosol, nucleus	43.17	21.64
KRH47770	Soybean	cytosol	43.72	21.51
KRH53640	Soybean	cytosol	42.62	21.37
KRH53638	Soybean	mitochondrion	42.62	21.37
KRH53639	Soybean	cytosol	41.53	20.77
KRG97256	Soybean	cytosol	38.8	19.09
KRH21852	Soybean	cytosol, nucleus	32.79	16.9
KRH13467	Soybean	cytosol	32.79	16.85
KRH56001	Soybean	cytosol	32.24	15.99
KRH25535	Soybean	cytosol	31.69	15.98
KRH31595	Soybean	cytoskeleton, cytosol, endoplasmic reticulum	31.69	15.85
VIT_18s0072g00920.t01	Wine grape	cytosol	45.36	13.52

Protein Annotations

Gene3D:3.40.50.150	MapMan:50.2.1	EMBL:ACUP02012187	EnsemblPlantsGene:GLYMA_20G003600	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0019438	GO:GO:0032259	InterPro:IPR016461	UniProt:K7N0J9
EnsemblPlants:KRG89138	ProteinID:KRG89138	ProteinID:KRG89138.1	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000296A55B

Description

hypothetical protein

Coordinates

chr20:+:350171..353534

Molecular Weight (calculated)

20999.9 Da

IEP (calculated)

8.479

GRAVY (calculated)

-0.046

Length

183 amino acids

Sequence
(BLAST)

001: MTFFFYKARI LDAPLELKRA LKLYIGFERV SILVDVGGGV GETLKQLLPK YPSMKGINFD LPQVIQKAPP HQGIEHIEGD MFESVPTGDV ILMKFVCHSW
101: ADEDGIKFLR NCHKALLQHG KVVVFEYIIP EVPNPRYISK HTCTLDNVMF LAQGRRERTQ GEFENLWKVF PSLMLQVVTS HLR

Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.