CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34966	Soybean	cytosol	91.67	89.43
KRH01239	Soybean	cytosol	64.17	61.11
KRH29977	Soybean	cytosol	59.72	58.74
KRH40858	Soybean	endoplasmic reticulum	55.28	53.93
KRG89138	Soybean	golgi	26.67	52.46
KRH40859	Soybean	cytosol	51.11	51.54
KRG89137	Soybean	cytosol	51.94	50.54
KRH64288	Soybean	cytosol, nucleus	49.17	48.49
KRH53640	Soybean	cytosol	48.33	47.67
KRH53638	Soybean	mitochondrion	47.78	47.12
KRH53639	Soybean	cytosol	47.5	46.72
KRH64289	Soybean	cytosol	41.67	45.05
KRH47770	Soybean	cytosol	44.17	42.74
KRH14071	Soybean	cytosol	23.89	41.75
KRH47769	Soybean	cytosol	38.89	39.55
KRH47768	Soybean	cytosol	35.0	38.53
KRG97256	Soybean	cytosol	39.44	38.17
KRH21852	Soybean	cytosol, nucleus	35.28	35.77
KRH13467	Soybean	cytosol	34.72	35.11
KRH31595	Soybean	cytoskeleton, cytosol, endoplasmic reticulum	30.56	30.05
VIT_18s0072g00920.t01	Wine grape	cytosol	50.28	29.48
KRH56001	Soybean	cytosol	29.17	28.46
KRH25535	Soybean	cytosol	28.61	28.37

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	UniProt:A0A0R0EME4	EMBL:ACUP02012708	EnsemblPlantsGene:GLYMA_20G176100
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0008757	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019438	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	EnsemblPlants:KRG91815
ProteinID:KRG91815	ProteinID:KRG91815.1	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100
PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases
SUPFAM:SSF46785	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0006EDFC77	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:41333822..41335521

Molecular Weight (calculated)

39907.3 Da

IEP (calculated)

5.399

GRAVY (calculated)

-0.003

Length

360 amino acids

Sequence
(BLAST)

001: MGESNVMTKT EDGACLSAML LSTNLVYPAV LNAAIELNLF EIIAKATPAG SFMSSHEIAS KLPTQHPDLP NRLDRMLRLL ASYSVLTTST RTTHHGATET
101: VYGLSQVGQY FVPDGTRGYL ASFTAFVCYP PLLQVWLNFK EAMVDADIDL FKKIHGVTMY QYMENDPKMN QIFNKSMANL CATEMSRILE IYTGFEGIST
201: LVDVGGGNGQ NLKMIISKYP LIKGINFDLP QVIENAPPLP GIEHVGGDMF ARVPQGDAII LKAVCHNWSD EKCIEFLRNC HKALSPNGKV IVVEFILPEE
301: PEPTEESQLV STLDNLMFIT VGGRERTQKQ YETLCKLSGF SNFQVACRAF SSLGVMEFYK

Best Arabidopsis Sequence Match ( AT1G33030.1 )
(BLAST)

001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK

Arabidopsis Description

At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.