Factsheet for VIT_18s0001g02610.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0135g00030.t01	Wine grape	cytosol	95.7	95.7
VIT_08s0032g01130.t01	Wine grape	golgi	46.24	91.49
VIT_15s0048g02480.t01	Wine grape	cytosol	52.42	54.32
VIT_15s0048g02450.t01	Wine grape	cytosol	51.88	54.06
VIT_15s0048g02490.t01	Wine grape	cytosol	51.34	53.35
VIT_02s0025g02920.t01	Wine grape	cytosol	50.0	51.24
VIT_15s0048g02460.t01	Wine grape	cytosol	51.88	48.86
VIT_10s0003g04160.t01	Wine grape	cytosol	41.67	43.3
VIT_08s0007g04520.t01	Wine grape	cytosol	35.48	36.87
VIT_12s0059g01790.t01	Wine grape	cytosol	34.41	34.69
VIT_12s0059g01750.t01	Wine grape	cytosol	34.14	34.6
VIT_03s0038g03090.t01	Wine grape	cytosol	30.91	32.58
VIT_03s0038g03080.t01	Wine grape	cytosol	31.18	31.69
VIT_16s0098g00850.t01	Wine grape	cytosol	61.83	31.08
VIT_18s0072g00920.t01	Wine grape	cytosol	49.19	29.8

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100242108	wikigene:100242108	MapMan:21.6.1.7	Gene3D:3.40.50.150	EMBL:AM453202
ProteinID:CAN76660	ProteinID:CAN76660.1	ProteinID:CCB45480	ProteinID:CCB45480.1	UniProt:F6H0K8	EMBL:FN595227
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0008757	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019438	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	EntrezGene:LOC100242108
wikigene:LOC100242108	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF118	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785
SUPFAM:SSF53335	TIGR:TC56956	UniParc:UPI000210A04B	ArrayExpress:VIT_18s0001g02610	EnsemblPlantsGene:VIT_18s0001g02610	EnsemblPlants:VIT_18s0001g02610.t01
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_003634428	RefSeq:XP_003634428.1	:	:

Description

No Description!

Coordinates

chr18:+:2845415..2847110

Molecular Weight (calculated)

41277.9 Da

IEP (calculated)

5.254

GRAVY (calculated)

-0.017

Length

372 amino acids

Sequence
(BLAST)

001: MSSNRLDSYP MSKLQFEGED EEELGKLAVR LANGIILPMA LKSALELNLI EILAGAGDGA FLSPSEIAAY LPARNPDAPV LLDRVLRLLA SYSILKCSLR
101: TLDNGEVERL YGVGPICKFL TRNPDGGSIG PLFLLHHDKV FMESWYHLND AILEGGIPFN RAYGMTAFEY PGTDQRFNRV FNEAMSNHTT LIMKRILQIY
201: KGFEGLKVLV DVGGGIGVTL RIITSEYPQI KGINYDLPHV LADAPSYPGV EHVGGDMFES VPKGDAIFMK WILHDWSDEH CLKLLTNCFE ALPDNGKVII
301: VESILHVAPE NTVSANIPFE QDLLMLAQNP GGKERTQKEY ETLAIKSGFS CCKVICSVYN SWVMEFHKTA HP

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.