Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17514 | Canola | cytosol | 97.88 | 92.55 |
| CDX72522 | Canola | cytosol | 87.88 | 90.62 |
| CDY67664 | Canola | cytosol | 86.97 | 89.69 |
| Bra034677.1-P | Field mustard | cytosol | 99.7 | 89.4 |
| CDX72521 | Canola | cytosol | 85.15 | 85.93 |
| AT4G35150.1 | Thale cress | cytosol | 84.24 | 85.54 |
| CDY17512 | Canola | cytosol | 84.24 | 78.31 |
| CDY09084 | Canola | cytosol | 79.09 | 76.76 |
| AT4G35160.1 | Thale cress | cytosol | 87.27 | 75.39 |
| CDY67665 | Canola | cytosol | 60.91 | 71.79 |
| CDY51573 | Canola | cytosol | 79.39 | 66.67 |
| CDY09082 | Canola | cytosol | 38.79 | 64.65 |
| VIT_03s0038g03090.t01 | Wine grape | cytosol | 53.03 | 49.58 |
| PGSC0003DMT400000736 | Potato | cytosol | 36.36 | 47.43 |
| VIT_03s0038g03080.t01 | Wine grape | cytosol | 52.12 | 46.99 |
| KRH31595 | Soybean | cytoskeleton, cytosol, endoplasmic reticulum | 50.91 | 45.9 |
| Solyc01g111900.2.1 | Tomato | cytosol | 47.27 | 43.7 |
| PGSC0003DMT400047988 | Potato | cytosol | 47.27 | 43.7 |
| Solyc12g009110.1.1 | Tomato | cytosol | 48.48 | 43.36 |
| PGSC0003DMT400047989 | Potato | cytosol | 43.03 | 42.14 |
| PGSC0003DMT400095923 | Potato | cytosol | 49.09 | 41.12 |
| CDY18302 | Canola | cytosol | 23.33 | 37.38 |
| CDY18304 | Canola | cytosol | 23.33 | 37.38 |
| CDY19039 | Canola | cytosol | 32.42 | 30.4 |
| CDY19037 | Canola | cytosol | 33.94 | 30.35 |
| CDX68055 | Canola | extracellular | 30.0 | 29.29 |
| CDY29477 | Canola | cytosol | 25.45 | 29.27 |
| CDX68776 | Canola | cytosol | 26.06 | 29.05 |
| CDY55338 | Canola | cytosol | 26.06 | 29.05 |
| CDY14330 | Canola | cytosol | 31.21 | 28.45 |
| CDY54813 | Canola | cytosol | 31.21 | 28.3 |
| CDY14328 | Canola | cytosol | 30.91 | 28.02 |
| CDX68056 | Canola | cytosol | 32.12 | 27.82 |
| CDY29856 | Canola | cytosol | 30.91 | 27.79 |
| CDY18306 | Canola | cytosol | 30.61 | 27.75 |
| CDY45380 | Canola | cytosol | 31.52 | 27.51 |
| CDY43839 | Canola | cytosol | 30.3 | 27.47 |
| CDY43052 | Canola | cytosol | 30.3 | 27.47 |
| CDY70033 | Canola | cytosol | 19.09 | 27.39 |
| CDY49883 | Canola | cytosol | 31.21 | 27.25 |
| CDX92835 | Canola | cytosol | 30.3 | 27.25 |
| CDX84055 | Canola | cytosol | 29.39 | 27.25 |
| CDY59571 | Canola | cytosol | 31.21 | 27.03 |
| CDX75190 | Canola | cytosol | 28.48 | 26.93 |
| CDY38336 | Canola | cytosol | 30.61 | 26.93 |
| CDY44972 | Canola | cytosol | 29.39 | 26.87 |
| CDY38339 | Canola | cytosol | 30.91 | 26.77 |
| CDY29475 | Canola | cytosol | 30.0 | 26.54 |
| CDX79208 | Canola | cytosol | 30.61 | 26.51 |
| CDY52173 | Canola | cytosol | 29.39 | 26.5 |
| CDY44537 | Canola | cytosol | 30.0 | 26.4 |
| CDY04598 | Canola | cytosol | 29.7 | 26.27 |
| CDY23305 | Canola | cytosol | 28.79 | 26.17 |
| CDY00362 | Canola | cytosol | 29.09 | 26.02 |
| CDY01334 | Canola | cytosol | 29.09 | 26.02 |
| CDY54913 | Canola | cytosol | 30.0 | 25.98 |
| CDX94511 | Canola | cytosol | 30.0 | 25.98 |
| CDY33668 | Canola | cytosol | 29.09 | 25.81 |
| CDX87513 | Canola | cytosol | 28.18 | 25.76 |
| CDY28789 | Canola | cytosol | 28.18 | 25.76 |
| CDY63947 | Canola | cytosol | 29.7 | 25.72 |
| CDX96602 | Canola | cytosol | 29.09 | 25.67 |
| CDX96604 | Canola | cytosol | 20.61 | 25.56 |
| CDY04597 | Canola | cytosol | 28.79 | 25.54 |
| CDY01335 | Canola | cytosol | 28.48 | 25.47 |
| CDY64795 | Canola | cytosol | 28.18 | 25.41 |
| CDX68054 | Canola | cytosol | 28.79 | 25.13 |
| CDY04600 | Canola | cytosol | 28.48 | 25.07 |
| CDX88377 | Canola | cytosol | 28.48 | 24.87 |
| CDX79210 | Canola | cytosol | 28.48 | 24.87 |
| CDY33669 | Canola | cytosol | 28.18 | 24.87 |
| CDX88317 | Canola | cytosol | 27.58 | 24.59 |
| CDX87567 | Canola | cytosol | 27.58 | 24.59 |
| CDX95399 | Canola | cytosol | 26.67 | 24.51 |
| CDY42934 | Canola | cytosol | 28.79 | 24.3 |
| CDY01333 | Canola | cytosol | 27.58 | 24.27 |
| CDX85972 | Canola | cytosol | 26.97 | 24.05 |
| CDY01900 | Canola | cytosol | 27.88 | 23.9 |
| CDY00361 | Canola | cytosol | 28.48 | 23.74 |
| CDY49745 | Canola | cytosol | 24.24 | 23.05 |
| CDX68085 | Canola | cytosol | 22.42 | 22.63 |
| CDY00364 | Canola | cytosol | 23.64 | 22.61 |
| CDX76223 | Canola | cytosol | 18.18 | 22.39 |
| CDX84061 | Canola | cytosol | 16.97 | 21.05 |
| CDY41780 | Canola | cytosol | 14.55 | 18.75 |
| CDY52172 | Canola | cytosol | 28.48 | 17.84 |
| CDY64794 | Canola | cytosol | 10.91 | 17.48 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:A0A078CGI0 | EnsemblPlants:CDX76316 | ProteinID:CDX76316 |
| ProteinID:CDX76316.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00126688001 |
| InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 | PFAM:PF08100 |
| PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF98 | InterPro:Plant_MeTrfase_dimerisation | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF46785 | SUPFAM:SSF53335 | UniParc:UPI0004EF0487 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : |
Description
BnaA08g10840D
Coordinates
chrLK031807:-:318258..321282
Molecular Weight (calculated)
37094.9 Da
IEP (calculated)
5.303
GRAVY (calculated)
-0.082
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEECKRNLVD EEAKASLDIW RYVFGFADIA AAKCAIDLKI PEAIENHPSS QPMTLAELSS TVSASPSHLR RIMRFLVHQG IFKEVPIKDG LTTGYTNTPL
101: SRRMMITKRD GKSLAPFDVW ALAEDNPCFS EMINEAMACD TRRVVPRVAR ACHDLFNGVA TVVDVGGGNG EAVGILVKEF PWIKGFNFDL PHVIDVAQVL
201: DGVENVGGDM FDSIPKCDAV FIKWVLHDWG DKDCIKILKN CKEAVPANIG KVFIVESVIR ENKKTMIVEE RDEKLEHVRL MLDMVMMAHT STGKERTLKE
301: WDFVLNEAGF ARYEVRDIDD VQCVIIAYRS
101: SRRMMITKRD GKSLAPFDVW ALAEDNPCFS EMINEAMACD TRRVVPRVAR ACHDLFNGVA TVVDVGGGNG EAVGILVKEF PWIKGFNFDL PHVIDVAQVL
201: DGVENVGGDM FDSIPKCDAV FIKWVLHDWG DKDCIKILKN CKEAVPANIG KVFIVESVIR ENKKTMIVEE RDEKLEHVRL MLDMVMMAHT STGKERTLKE
301: WDFVLNEAGF ARYEVRDIDD VQCVIIAYRS
001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
Arabidopsis Description
ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.