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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64794 Canola cytosol 53.01 94.17
CDY64795 Canola cytosol 85.25 85.25
AT1G51990.1 Thale cress cytosol 72.13 72.73
CDY54813 Canola cytosol 63.11 63.46
CDY52172 Canola cytosol 84.7 58.82
CDX84061 Canola cytosol 42.08 57.89
CDY18304 Canola cytosol 27.6 49.03
CDY18302 Canola cytosol 27.6 49.03
PGSC0003DMT400051777 Potato cytosol 20.49 46.88
CDY14330 Canola cytosol 43.72 44.2
CDY43052 Canola cytosol 43.72 43.96
CDY18306 Canola cytosol 43.72 43.96
Solyc06g083450.2.1 Tomato cytosol 27.6 43.91
CDY43839 Canola cytosol 43.44 43.68
CDY14328 Canola cytosol 43.17 43.41
CDY29856 Canola cytosol 43.17 43.05
CDY19039 Canola cytosol 41.26 42.9
CDY19037 Canola cytosol 43.17 42.82
CDX92835 Canola cytosol 41.8 41.69
CDY28789 Canola cytosol 40.16 40.72
CDY55338 Canola cytosol 32.79 40.54
CDY29477 Canola cytosol 31.42 40.07
PGSC0003DMT400051785 Potato cytosol 39.34 39.67
PGSC0003DMT400051781 Potato cytosol 39.07 39.61
CDX68776 Canola cytosol 31.69 39.19
PGSC0003DMT400038092 Potato cytosol 36.89 38.79
PGSC0003DMT400051773 Potato cytosol 37.7 38.76
CDX96604 Canola cytosol 27.87 38.35
CDX68055 Canola extracellular 35.25 38.17
CDX68056 Canola cytosol 39.07 37.53
CDY04598 Canola cytosol 37.98 37.27
CDY29475 Canola cytosol 37.98 37.27
CDY01335 Canola cytosol 37.43 37.13
CDX79208 Canola cytosol 38.25 36.75
CDY41780 Canola cytosol 25.68 36.72
CDY23305 Canola cytosol 36.34 36.64
CDY33669 Canola cytosol 37.43 36.63
Solyc06g007960.2.1 Tomato cytosol 36.07 36.57
CDX96602 Canola cytosol 37.16 36.36
CDX87513 Canola cytosol 35.79 36.29
CDX79210 Canola cytosol 37.43 36.24
CDY00362 Canola cytosol 36.34 36.04
CDY01334 Canola cytosol 36.34 36.04
CDX68054 Canola cytosol 37.16 35.98
CDY54913 Canola cytosol 37.43 35.96
CDY38339 Canola cytosol 37.43 35.96
CDY63947 Canola cytosol 37.43 35.96
CDX75190 Canola cytosol 34.15 35.82
CDY04597 Canola cytosol 36.34 35.75
CDY04600 Canola cytosol 36.61 35.73
CDY59571 Canola cytosol 37.16 35.7
CDX88317 Canola cytosol 36.07 35.68
CDY33668 Canola cytosol 36.07 35.48
CDY49883 Canola cytosol 36.61 35.45
CDY45380 Canola cytosol 36.61 35.45
CDX87567 Canola cytosol 35.79 35.41
CDY38336 Canola cytosol 36.07 35.2
CDY01333 Canola cytosol 35.79 34.93
CDX88377 Canola cytosol 36.07 34.92
CDX85972 Canola cytosol 35.25 34.86
CDY70033 Canola cytosol 21.86 34.78
CDY44537 Canola cytosol 35.52 34.67
CDX84055 Canola cytosol 33.61 34.55
CDY44972 Canola cytosol 33.61 34.07
CDX94511 Canola cytosol 35.25 33.86
CDY49745 Canola cytosol 31.69 33.43
CDY00364 Canola cytosol 31.15 33.04
CDY42934 Canola cytosol 34.97 32.74
CDY00361 Canola cytosol 35.25 32.58
CDY01900 Canola cytosol 34.15 32.47
CDX68085 Canola cytosol 28.42 31.8
CDX95399 Canola cytosol 29.51 30.08
CDY09082 Canola cytosol 16.12 29.8
CDX72521 Canola cytosol 26.5 29.66
CDX76223 Canola cytosol 21.58 29.48
CDX76316 Canola cytosol 26.5 29.39
CDX72522 Canola cytosol 25.68 29.38
CDY17512 Canola cytosol 28.14 29.01
CDY67664 Canola cytosol 24.86 28.44
CDY17514 Canola cytosol 26.5 27.79
CDY09084 Canola cytosol 25.41 27.35
CDY51573 Canola cytosol 28.14 26.21
CDY67665 Canola cytosol 19.13 25.0
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078ISZ6UniProt:A0A078ISZ6EnsemblPlants:CDY52173
ProteinID:CDY52173ProteinID:CDY52173.1InterPro:De-COase2_CSGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740
GO:GO:0032259GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00005023001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739ScanProsite:PS00879PFscan:PS51683
PANTHER:PTHR11746PANTHER:PTHR11746:SF114InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335
UniParc:UPI0004EC1837InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sf:::
Description
BnaC01g22360DBnaC01g22360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISZ6]
Coordinates
chrLK033062:+:30282..32788
Molecular Weight (calculated)
40980.6 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.127
Length
366 amino acids
Sequence
(BLAST)
001: MNSLQNSGGP SNEEEDMLLA MHLCGIDLIA YAVKTATELD LFEIMAKARP LGTHLSTLDL ASKTAPNNPD ASVMIDRLLR LLVAYSVCTC KFVKDEKGRE
101: SRTCGLGKVG KKFIKDENGV SIASYVLFHC SHTKGVTWSY LTESILEGGA SAWERANEPF LFEYMKKTEN VKEDFNESMM SHTTIVMKKI FENYHGFESM
201: RDCTLVDVGG GLGTSLSQAL SKFPHLKCVN FDLPHVVSEA PQIHGVEHIG GDMFDEVPRG QAILMKWILH DWSDEKCVKI LRNCKKAVPD SGRVIVIETI
301: IPREVSDTDI ATKNALHLDM IMMCLTRGGR ERTKEEFEVL AMKAGFKLPN FIYGAYSFWV IELYTN
Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)
001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
Arabidopsis Description
F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.