Factsheet for Solyc06g007960.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038092	Potato	cytosol	91.14	94.54
Solyc06g083450.2.1	Tomato	cytosol	36.01	56.52
Solyc06g060200.1.1	Tomato	cytosol	17.17	49.21
Solyc03g080180.2.1	Tomato	extracellular	45.43	45.94
Solyc10g005060.2.1	Tomato	cytosol	41.83	41.48
Bra033498.1-P	Field mustard	cytosol	32.41	39.93
AT1G51990.1	Thale cress	cytosol	39.61	39.39
CDY54813	Canola	cytosol	38.78	38.46
Solyc06g060220.1.1	Tomato	cytosol	12.47	38.46
Bra035482.1-P	Field mustard	cytosol	38.78	38.46
CDY64795	Canola	cytosol	37.67	37.16
CDY52173	Canola	cytosol	36.57	36.07
CDY64794	Canola	cytosol	18.01	31.55
Solyc01g111900.2.1	Tomato	cytosol	31.02	31.37
CDX84061	Canola	cytosol	22.99	31.2
Solyc10g085830.1.1	Tomato	plastid	30.19	30.19
Solyc12g009110.1.1	Tomato	cytosol	29.36	28.73
CDY52172	Canola	cytosol	36.84	25.24

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019438	GO:GO:0032259	GO:GO:0046983
InterPro:IPR016461	InterPro:IPR036388	UniProt:K4C3H6	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc06g007960.2	EnsemblPlants:Solyc06g007960.2.1	UniParc:UPI000276633A
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:1816553..1820314

Molecular Weight (calculated)

40717.5 Da

IEP (calculated)

5.889

GRAVY (calculated)

-0.084

Length

361 amino acids

Sequence
(BLAST)

001: MEISPTNQSK KMISKEEEED MLSVMQLPIS LALNMVLKVT MELGIFDLLS LNSQLSSSQI ASKIPTKNPQ APIMIEKILS FLANQSLLKF TLFKEDDENG
101: PFYSLTPLSR NLVSNNDEMS IAPTFLFIND QAMVNSWFCL KDAILEGEIP FNKANGMGVF EYHEKNSRYA EVTNKSTQTL NKITITKILE TYNGFQEVKQ
201: LVDVGGALGS TMASIVSKYP HIKGVNFDLP HVIKDAPVYP GVEHVSGDMF KSVPQGDVIF MKHVIHDWDD DDCIKILKNC WKSLPNFGKV VLVEHIKPNN
301: PQKNDFFSKN AFFLDVLLMV VTHGGKERTM EEIEILAKKS GFSGFKVINS AFLIWIMELY K

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.