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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035482.1-P Field mustard cytosol 90.6 66.21
CDY54813 Canola cytosol 90.6 66.21
CDY64794 Canola cytosol 47.37 61.16
AT1G51990.1 Thale cress cytosol 58.27 42.7
CDY64795 Canola cytosol 58.27 42.35
CDY52173 Canola cytosol 57.89 42.08
CDY41780 Canola cytosol 35.34 36.72
CDY55338 Canola cytosol 36.84 33.11
CDY18306 Canola cytosol 40.6 29.67
CDY43052 Canola cytosol 40.6 29.67
CDY14328 Canola cytosol 40.23 29.4
CDY43839 Canola cytosol 40.23 29.4
CDY14330 Canola cytosol 39.85 29.28
CDY52172 Canola cytosol 57.89 29.22
CDY29856 Canola cytosol 40.23 29.16
CDY19037 Canola cytosol 39.85 28.73
CDX92835 Canola cytosol 39.47 28.61
CDY19039 Canola cytosol 37.22 28.12
CDY28789 Canola cytosol 35.34 26.04
PGSC0003DMT400051781 Potato cytosol 33.46 24.65
PGSC0003DMT400051773 Potato cytosol 32.33 24.16
CDX76223 Canola cytosol 24.06 23.88
PGSC0003DMT400038092 Potato cytosol 31.2 23.85
PGSC0003DMT400051785 Potato cytosol 31.95 23.42
CDX79208 Canola cytosol 33.08 23.1
Solyc06g007960.2.1 Tomato cytosol 31.2 22.99
CDX68056 Canola cytosol 32.71 22.83
CDY18304 Canola cytosol 17.67 22.82
CDY18302 Canola cytosol 17.67 22.82
CDX68055 Canola extracellular 28.95 22.78
CDX96604 Canola cytosol 22.56 22.56
CDY29475 Canola cytosol 31.58 22.52
CDX68776 Canola cytosol 24.81 22.3
CDY04598 Canola cytosol 31.2 22.25
CDY01335 Canola cytosol 30.83 22.22
CDX88377 Canola cytosol 31.58 22.22
CDY00362 Canola cytosol 30.83 22.22
CDY01334 Canola cytosol 30.83 22.22
CDY33669 Canola cytosol 30.83 21.93
CDX96602 Canola cytosol 30.83 21.93
CDX87513 Canola cytosol 29.7 21.88
CDY01333 Canola cytosol 30.83 21.87
CDY04600 Canola cytosol 30.45 21.6
CDY54913 Canola cytosol 30.83 21.52
CDY33668 Canola cytosol 30.08 21.51
CDY04597 Canola cytosol 30.08 21.51
CDY23305 Canola cytosol 29.32 21.49
Solyc06g083450.2.1 Tomato cytosol 18.42 21.3
CDY59571 Canola cytosol 30.45 21.26
CDY63947 Canola cytosol 30.45 21.26
CDY38339 Canola cytosol 30.45 21.26
CDY29477 Canola cytosol 22.93 21.25
CDY67665 Canola cytosol 22.18 21.07
CDX75190 Canola cytosol 27.44 20.92
CDX88317 Canola cytosol 28.95 20.81
CDX87567 Canola cytosol 28.95 20.81
CDY38336 Canola cytosol 29.32 20.8
CDY00361 Canola cytosol 30.83 20.71
CDX79210 Canola cytosol 29.32 20.63
CDX68054 Canola cytosol 29.32 20.63
CDY45380 Canola cytosol 28.95 20.37
CDY49883 Canola cytosol 28.95 20.37
CDX85972 Canola cytosol 28.2 20.27
CDY44537 Canola cytosol 28.57 20.27
CDY00364 Canola cytosol 25.56 19.71
CDX94511 Canola cytosol 28.2 19.68
CDY49745 Canola cytosol 25.56 19.6
CDY42934 Canola cytosol 28.57 19.44
CDY44972 Canola cytosol 26.32 19.39
CDX84055 Canola cytosol 25.94 19.38
CDY01900 Canola cytosol 27.44 18.96
CDY09082 Canola cytosol 13.53 18.18
CDX95399 Canola cytosol 24.06 17.83
CDX68085 Canola cytosol 21.43 17.43
CDX76316 Canola cytosol 21.05 16.97
CDY70033 Canola cytosol 14.29 16.52
CDX72521 Canola cytosol 20.3 16.51
CDX72522 Canola cytosol 19.55 16.25
CDY17512 Canola cytosol 21.43 16.06
CDY17514 Canola cytosol 20.68 15.76
CDY51573 Canola cytosol 22.18 15.01
CDY09084 Canola cytosol 19.17 15.0
CDY67664 Canola cytosol 17.67 14.69
PGSC0003DMT400051777 Potato cytosol 7.89 13.12
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078D3Z9EnsemblPlants:CDX84061ProteinID:CDX84061
ProteinID:CDX84061.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00139932001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF114InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785
SUPFAM:SSF53335UniParc:UPI0004EEBF7CInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg:
Description
BnaC08g07380D
Coordinates
chrLK031835:-:477667..481768
Molecular Weight (calculated)
29287.0 Da
IEP (calculated)
7.867
GRAVY (calculated)
-0.014
Length
266 amino acids
Sequence
(BLAST)
001: MNSTQIPPDE DEEDMLLAMQ LIGLRIVPYA IKTAIELDLL EIIAKAGPLG THLSPLDLAS KVAARNPDAP MMIDRLLRLL SAYSVCTCKL VNDKEGKEFR
101: IYGLGKAGRK LIKDEDRFSL ASTLRFTNPK FEGDMCSQLT ASILEGGARA YERVYGDLIF KDMEKNENIR AEFNEAMLNH TSIVMKKILK TYNGFNSLSG
201: GVLVDVGGGL GANLALILSR LPKLKGVNFD LPHVVSEAPK IKGLRLEVGL CLCIYTHVNG QYKTQV
Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)
001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
Arabidopsis Description
F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.