Factsheet for PGSC0003DMT400051773

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051781	Potato	cytosol	91.01	89.75
PGSC0003DMT400051777	Potato	cytosol	39.61	88.12
Solyc06g083450.2.1	Tomato	cytosol	55.34	85.65
PGSC0003DMT400051785	Potato	cytosol	85.11	83.47
PGSC0003DMT400038092	Potato	cytosol	52.81	54.02
PGSC0003DMT400045239	Potato	cytosol	34.55	48.81
PGSC0003DMT400001512	Potato	cytosol	47.47	46.56
PGSC0003DMT400029318	Potato	cytosol	46.63	45.73
PGSC0003DMT400070160	Potato	cytosol	45.51	44.88
PGSC0003DMT400034726	Potato	cytosol	44.94	44.57
AT1G51990.1	Thale cress	cytosol	44.1	43.25
PGSC0003DMT400020336	Potato	cytosol	26.97	40.34
Bra033498.1-P	Field mustard	cytosol	31.74	38.57
CDY54813	Canola	cytosol	39.04	38.19
Bra035482.1-P	Field mustard	cytosol	39.04	38.19
CDY52173	Canola	cytosol	38.76	37.7
CDY64795	Canola	cytosol	38.2	37.16
CDY64794	Canola	cytosol	19.94	34.47
PGSC0003DMT400000736	Potato	cytosol	23.03	32.41
CDX84061	Canola	cytosol	24.16	32.33
PGSC0003DMT400022143	Potato	cytosol	32.58	32.13
PGSC0003DMT400047988	Potato	cytosol	30.06	29.97
PGSC0003DMT400047989	Potato	cytosol	26.69	28.19
PGSC0003DMT400095923	Potato	cytosol	30.34	27.41
CDY52172	Canola	cytosol	38.48	26.0

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:102599938	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171
GO:GO:0016740	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	UniProt:M1BS71
InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	EnsemblPlantsGene:PGSC0003DMG400020094	PGSC:PGSC0003DMG400020094
EnsemblPlants:PGSC0003DMT400051773	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation
InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI000296EBB2	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf
RefSeq:XP_006352695.1	SEG:seg	:	:	:	:

Description

Catechol O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400020094]

Coordinates

chr6:-:58367625..58369281

Molecular Weight (calculated)

39962.6 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.041

Length

356 amino acids

Sequence
(BLAST)

001: MDNIVISSEE EISMMKAMHL PCGLFLNMVL RAAMELDLFE IIAKSTTQKL SSYEIASQIP TKNPNASLVL ERILRFLASQ SFLTCNITKN DDGNIHTSYS
101: LTPLSQSLIS DKDGSSIVPL LLLNTGPVGV NAWFHLKDAI LEGEIPFNKA HGMHAFEYNG KDSRMNGVFN KAMQNVTCIE MKRIVECYNG FKGVKEIVDV
201: GGGLGISLAS IISKYPNIKG INFDLSHVIK DAPIYEGIEH VGGDMWKSIP QGELIILKAV LHNWDDEDCV KILKNCWRAL PKDGKVVVIE RIQPEYPETN
301: LLSKHSFSFD ISMIIFHGGK ERIKQQFEDL AKQAGFTSLK VVARAYYSWV MEFYKY

Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.