Factsheet for PGSC0003DMT400020336

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045239	Potato	cytosol	44.96	42.46
PGSC0003DMT400000736	Potato	cytosol	43.28	40.71
VIT_12s0059g01750.t01	Wine grape	cytosol	62.6	40.6
KRH25535	Soybean	cytosol	61.76	40.5
VIT_12s0059g01790.t01	Wine grape	cytosol	62.6	40.38
KRH56001	Soybean	cytosol	61.76	39.84
PGSC0003DMT400051777	Potato	cytosol	25.21	37.5
PGSC0003DMT400047988	Potato	cytosol	47.06	31.37
PGSC0003DMT400047989	Potato	cytosol	42.86	30.27
PGSC0003DMT400034726	Potato	cytosol	43.28	28.69
PGSC0003DMT400070160	Potato	cytosol	42.86	28.25
PGSC0003DMT400029318	Potato	cytosol	42.02	27.55
PGSC0003DMT400051773	Potato	cytosol	40.34	26.97
PGSC0003DMT400038092	Potato	cytosol	38.66	26.44
PGSC0003DMT400001512	Potato	cytosol	39.92	26.17
PGSC0003DMT400095923	Potato	cytosol	42.44	25.63
PGSC0003DMT400051785	Potato	cytosol	38.66	25.34
PGSC0003DMT400051781	Potato	cytosol	37.4	24.65
PGSC0003DMT400022143	Potato	cytosol	31.51	20.78

Protein Annotations

EntrezGene:102579643	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	InterPro:IPR016461
UniProt:M1ADB4	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	EnsemblPlantsGene:PGSC0003DMG400007863	PGSC:PGSC0003DMG400007863
EnsemblPlants:PGSC0003DMT400020336	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF111	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI000294C4E2	RefSeq:XP_015165325.1	:	:	:	:

Description

Caffeic acid 3-O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400007863]

Coordinates

chr12:-:1631727..1634585

Molecular Weight (calculated)

26810.6 Da

IEP (calculated)

6.163

GRAVY (calculated)

-0.084

Length

238 amino acids

Sequence
(BLAST)

001: MFLFQTNPIF MAPWHYFSNC IKEGGIAFKK AHGCEIFEMA SKDDELNKNF NNGMNSMTKC IMREVIKVYK DGFNSITSLV DVGGGIGGAM FEIVKAYPHI
101: KGINFDLPHV VLRAQKFEGV DHVEGDMFEA IPPADAVFLK WVLHDWGDED CVKILKNCRK AIPKKTGKLI IVDAVLKLEG EGLFDDVGFI TDLMMIAHTN
201: GGKERSEDKW NKLLKEAGFP RYNIIEISAW PSIIEAYP

Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)

001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN

Arabidopsis Description

F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.