Factsheet for PGSC0003DMT400000736

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400009060
PGSC0003DMT400058139

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35160.1	PGSC0003DMT400009060	AT3G60820.1	21798944
AT4G35160.1	PGSC0003DMT400058139	AT3G60820.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g009110.1.1	Tomato	cytosol	90.51	62.06
PGSC0003DMT400095923	Potato	cytosol	92.89	59.64
CDY09082	Canola	cytosol	38.74	49.49
VIT_03s0038g03090.t01	Wine grape	cytosol	66.8	47.88
PGSC0003DMT400047988	Potato	cytosol	63.24	44.82
PGSC0003DMT400047989	Potato	cytosol	59.29	44.51
VIT_03s0038g03080.t01	Wine grape	cytosol	62.85	43.44
PGSC0003DMT400020336	Potato	cytosol	40.71	43.28
KRH31595	Soybean	cytoskeleton, cytosol, endoplasmic reticulum	61.26	42.35
Bra038396.1-P	Field mustard	cytosol	54.55	37.6
PGSC0003DMT400045239	Potato	cytosol	37.15	37.3
CDX72522	Canola	cytosol	47.04	37.19
Bra017700.1-P	Field mustard	cytosol	53.36	36.78
Bra034677.1-P	Field mustard	cytosol	53.36	36.68
CDX76316	Canola	cytosol	47.43	36.36
CDX72521	Canola	cytosol	46.64	36.09
Bra017699.1-P	Field mustard	cytosol	52.17	36.07
CDY17512	Canola	cytosol	50.59	36.06
CDY67664	Canola	cytosol	45.45	35.94
AT4G35150.1	Thale cress	cytosol	45.85	35.69
CDY09084	Canola	cytosol	47.83	35.59
AT4G35160.1	Thale cress	cytosol	53.36	35.34
CDY51573	Canola	cytosol	54.15	34.86
CDY17514	Canola	cytosol	47.04	34.1
PGSC0003DMT400051777	Potato	cytosol	21.34	33.75
CDY67665	Canola	cytosol	30.04	27.14
PGSC0003DMT400001512	Potato	cytosol	37.15	25.9
Bra034678.1-P	Field mustard	cytosol	28.46	25.62
PGSC0003DMT400034726	Potato	cytosol	35.97	25.35
PGSC0003DMT400029318	Potato	cytosol	36.36	25.34
PGSC0003DMT400070160	Potato	cytosol	35.18	24.65
PGSC0003DMT400038092	Potato	cytosol	32.81	23.85
PGSC0003DMT400051785	Potato	cytosol	33.6	23.42
PGSC0003DMT400051773	Potato	cytosol	32.41	23.03
PGSC0003DMT400051781	Potato	cytosol	32.02	22.44
PGSC0003DMT400022143	Potato	cytosol	29.64	20.78

Protein Annotations

Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	InterPro:IPR016461	UniProt:M0ZH78
InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	EnsemblPlantsGene:PGSC0003DMG400000270	PGSC:PGSC0003DMG400000270	EnsemblPlants:PGSC0003DMT400000736
PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF98	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002947ED9
SEG:seg	:	:	:	:	:

Description

O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400000270]

Coordinates

chr12:+:3387630..3390476

Molecular Weight (calculated)

27662.2 Da

IEP (calculated)

5.098

GRAVY (calculated)

0.078

Length

253 amino acids

Sequence
(BLAST)

001: MAALLLFESS PVMLASWHNL SARISLKDNS MSSFEAAHGK DVWKYAEADP KHSNLLNNAM ACDARIVVST IIDGCPEIFE GVNTIVDVGG GDGTTLRLLV
101: EAFPWINGIN FDLPHVASVA PHAICVVHVG GDMFNYVPKA DAAFLMWVLH DWSDEECIQI LTKCREAIPQ DNGKVIIVEA IIGGKEESII RGSNNEKLKD
201: VGLMLDMVMM AHTSNGKERT SKEWAYVLNE AGFGRHTISH INAVQSVIQA YPS

Best Arabidopsis Sequence Match ( AT4G35160.1 )
(BLAST)

001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS

Arabidopsis Description

ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.