Factsheet for PGSC0003DMT400038092

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g007960.2.1	Tomato	cytosol	94.54	91.14
PGSC0003DMT400051777	Potato	cytosol	26.15	56.88
PGSC0003DMT400051781	Potato	cytosol	54.89	52.91
PGSC0003DMT400051773	Potato	cytosol	54.02	52.81
PGSC0003DMT400051785	Potato	cytosol	54.31	52.07
PGSC0003DMT400045239	Potato	cytosol	33.33	46.03
PGSC0003DMT400001512	Potato	cytosol	47.13	45.18
PGSC0003DMT400029318	Potato	cytosol	44.25	42.42
PGSC0003DMT400034726	Potato	cytosol	43.39	42.06
PGSC0003DMT400070160	Potato	cytosol	43.39	41.83
Bra033498.1-P	Field mustard	cytosol	34.48	40.96
AT1G51990.1	Thale cress	cytosol	41.67	39.94
CDY54813	Canola	cytosol	40.8	39.01
Bra035482.1-P	Field mustard	cytosol	40.8	39.01
PGSC0003DMT400020336	Potato	cytosol	26.44	38.66
CDY64795	Canola	cytosol	39.94	37.98
CDY52173	Canola	cytosol	38.79	36.89
PGSC0003DMT400000736	Potato	cytosol	23.85	32.81
CDY64794	Canola	cytosol	19.25	32.52
PGSC0003DMT400047988	Potato	cytosol	33.05	32.21
CDX84061	Canola	cytosol	23.85	31.2
PGSC0003DMT400047989	Potato	cytosol	29.6	30.56
PGSC0003DMT400022143	Potato	cytosol	31.03	29.92
PGSC0003DMT400095923	Potato	cytosol	31.32	27.66
CDY52172	Canola	cytosol	39.08	25.81

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0016740
GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	UniProt:M1B6B0	InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	EnsemblPlantsGene:PGSC0003DMG400014688	PGSC:PGSC0003DMG400014688	EnsemblPlants:PGSC0003DMT400038092
PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases
SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI00029655F9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	:

Description

Caffeic acid O-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400014688]

Coordinates

chr6:-:2100890..2104131

Molecular Weight (calculated)

39191.6 Da

IEP (calculated)

5.878

GRAVY (calculated)

-0.026

Length

348 amino acids

Sequence
(BLAST)

001: MSKEEEDILS VMQLPISLAL NMVLKVTMEL GIFDILSLNA QLSSSQIASK IPTKNPQAPI MIEKILCFLA NQSLLKFTLC KEDNENGPFY SLTPLSRNLV
101: SNKDEVSIAP TFLFLNDQAM VNSWFYLKDA ILEGEVPFNK AHGMGVFEYH EKNSRYAEVT NKSTQTLNKI TITKILETYN GFQEVKQLVD VGGALGSTMA
201: SIVSKYPHIK GVNFDLPHVI KDAPAYPGVE HVSGDMFQSV PQGDVIFMKH VIHDWDDDDC IKILKNCWKS LPNFGKVVLV EHIKPNNPQT NDFFSKNAFF
301: LDVFLMVVTP GGKERTMEEF EILAKKSGFS GFKVINSAFL IWIMELYK

Best Arabidopsis Sequence Match ( AT1G77520.1 )
(BLAST)

001: MTNHLQDPLP TYPKPVLTKE EQEVDEKMVS LQAESIVNTV AFPMVLKAAF ELGVIDTIAA AGNDTWLSPC EIACSLPTKP TNPEAPVLLD RMLSLLVSHS
101: ILKCRMIETG ENGRTGKIER VYAAEPVCKY FLRDSDGTGS LVPLFMLLHT QVFFKTWTNL KDVILEGRDA FNSAHGMKIF EYINSDQPFA ELFNRAMSEP
201: STMIMKKVLD VYRGFEDVNT LVDVGGGNGT VLGLVTSKYP HIKGVNFDLA QVLTQAPFYP GVEHVSGDMF VEVPKGDAVF MKWILHDWGD EDCIKILKNC
301: WKSLPEKGKI IIVEFVTPKE PKGGDLSSNT VFAMDLLMLT QCSGGKERSL SQFENLAFAS GFLRCEIICL AYSYSVIEFH K

Arabidopsis Description

O-methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9CAQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.