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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035482.1-P Field mustard cytosol 99.73 99.73
CDX84061 Canola cytosol 66.21 90.6
AT1G51990.1 Thale cress cytosol 64.84 65.01
CDY64795 Canola cytosol 64.29 63.93
CDY52173 Canola cytosol 63.46 63.11
CDY64794 Canola cytosol 34.34 60.68
PGSC0003DMT400051777 Potato cytosol 21.7 49.38
CDY18302 Canola cytosol 27.47 48.54
CDY18304 Canola cytosol 27.47 48.54
Solyc06g083450.2.1 Tomato cytosol 28.02 44.35
CDY18306 Canola cytosol 44.23 44.23
CDY14330 Canola cytosol 43.96 44.2
CDY52172 Canola cytosol 63.74 44.02
CDY43052 Canola cytosol 43.96 43.96
CDY14328 Canola cytosol 43.96 43.96
CDY43839 Canola cytosol 43.68 43.68
CDY29856 Canola cytosol 43.68 43.32
CDY19037 Canola cytosol 43.41 42.82
CDX92835 Canola cytosol 42.86 42.51
CDY19039 Canola cytosol 40.93 42.33
CDY55338 Canola cytosol 33.52 41.22
PGSC0003DMT400038092 Potato cytosol 39.01 40.8
CDY28789 Canola cytosol 40.38 40.72
PGSC0003DMT400051781 Potato cytosol 39.56 39.89
PGSC0003DMT400051773 Potato cytosol 38.19 39.04
CDY29477 Canola cytosol 30.77 39.02
Solyc06g007960.2.1 Tomato cytosol 38.46 38.78
PGSC0003DMT400051785 Potato cytosol 38.19 38.29
CDY70033 Canola cytosol 24.18 38.26
CDX68776 Canola cytosol 30.77 37.84
CDY41780 Canola cytosol 26.1 37.11
CDX68055 Canola extracellular 34.34 36.98
CDX96604 Canola cytosol 26.65 36.47
CDY04598 Canola cytosol 37.09 36.19
CDY29475 Canola cytosol 37.09 36.19
CDY01335 Canola cytosol 36.54 36.04
CDX68056 Canola cytosol 37.36 35.7
CDX79208 Canola cytosol 37.09 35.43
CDX96602 Canola cytosol 36.26 35.29
CDY01334 Canola cytosol 35.71 35.23
CDY00362 Canola cytosol 35.71 35.23
CDY33668 Canola cytosol 35.99 35.22
CDY04600 Canola cytosol 36.26 35.2
CDX88317 Canola cytosol 35.71 35.14
CDY33669 Canola cytosol 35.99 35.03
CDY23305 Canola cytosol 34.89 34.99
CDY04597 Canola cytosol 35.71 34.95
CDX87567 Canola cytosol 35.44 34.86
CDY01333 Canola cytosol 35.71 34.67
CDX87513 Canola cytosol 34.07 34.35
CDY54913 Canola cytosol 35.71 34.12
CDY38339 Canola cytosol 35.71 34.12
CDX84055 Canola cytosol 33.24 33.99
CDY59571 Canola cytosol 35.44 33.86
CDX85972 Canola cytosol 34.34 33.78
CDY49745 Canola cytosol 32.14 33.72
CDX79210 Canola cytosol 34.89 33.6
CDY45380 Canola cytosol 34.89 33.6
CDY49883 Canola cytosol 34.89 33.6
CDY44972 Canola cytosol 33.24 33.52
CDX68054 Canola cytosol 34.62 33.33
CDY63947 Canola cytosol 34.62 33.07
CDX88377 Canola cytosol 34.34 33.07
CDY38336 Canola cytosol 34.07 33.07
CDY44537 Canola cytosol 34.07 33.07
CDX75190 Canola cytosol 31.32 32.66
CDY00364 Canola cytosol 30.77 32.46
CDX68085 Canola cytosol 29.12 32.42
CDX94511 Canola cytosol 33.79 32.28
CDX95399 Canola cytosol 31.32 31.75
CDY00361 Canola cytosol 34.07 31.31
CDX76316 Canola cytosol 28.3 31.21
CDX72521 Canola cytosol 27.47 30.58
CDY42934 Canola cytosol 32.69 30.43
CDY01900 Canola cytosol 32.14 30.39
CDX72522 Canola cytosol 26.65 30.31
CDX76223 Canola cytosol 21.98 29.85
CDY09082 Canola cytosol 16.21 29.8
CDY17514 Canola cytosol 28.02 29.23
CDY17512 Canola cytosol 28.3 29.01
CDY09084 Canola cytosol 26.92 28.82
CDY67664 Canola cytosol 25.0 28.44
CDY67665 Canola cytosol 20.88 27.14
CDY51573 Canola cytosol 28.85 26.72
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078IXC1UniProt:A0A078IXC1EnsemblPlants:CDY54813
ProteinID:CDY54813ProteinID:CDY54813.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00014682001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF114
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EDB880InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaA08g29990DBnaA08g29990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXC1]
Coordinates
chrLK033352:+:51736..55749
Molecular Weight (calculated)
40581.6 Da
IEP (calculated)
5.744
GRAVY (calculated)
-0.044
Length
364 amino acids
Sequence
(BLAST)
001: MNSTQIPLDE DEEDMLLAMQ LIGLRIVPYA IKTAIELDLL EIIAKAGPLG THLSPLDLAS KVAARNPDAP MMIDRLLRLL SAYSVCTCRL VNDKEEREFR
101: VYGLGKAGRK LIKDEDRFSL ASTVRFTNPK FEGDMCSQLT ASILEGGARP YERVYGDLIF KDMEKNENIR AEFHEAMLNH TSIVMKKILK TYNGFNSLSG
201: GVLVDVGGGL GANLALILSR LPQLKGVNFD LPHVVSEAPK IKGVEHVGGD MFDAIPRGQA IFMKWILHDW NDDQCVAILK NCKKALPKNG KVIIIEYIMP
301: REISETDLAT KNSLFYDVGI MCATQGGKER TKEEFEVLAM KAGFNIPNII YGAYSFWILE LYAD
Best Arabidopsis Sequence Match ( AT1G51990.1 )
(BLAST)
001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
Arabidopsis Description
F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.