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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68054 Canola cytosol 97.62 97.62
Bra003680.1-P Field mustard cytosol 97.35 97.35
CDX68055 Canola extracellular 71.69 80.18
CDX88377 Canola cytosol 70.37 70.37
CDX87513 Canola cytosol 66.67 69.81
CDY49883 Canola cytosol 63.76 63.76
CDY45380 Canola cytosol 63.76 63.76
CDY59571 Canola cytosol 63.49 62.99
CDY54913 Canola cytosol 63.49 62.99
CDY38339 Canola cytosol 63.23 62.73
CDX68056 Canola cytosol 63.23 62.73
CDY38336 Canola cytosol 61.64 62.13
CDY23305 Canola cytosol 59.52 61.98
CDY63947 Canola cytosol 62.43 61.94
CDY44537 Canola cytosol 61.11 61.6
CDX79208 Canola cytosol 61.38 60.89
CDX68776 Canola cytosol 47.62 60.81
CDX94511 Canola cytosol 60.32 59.84
CDX75190 Canola cytosol 54.5 59.03
CDY01900 Canola cytosol 60.05 58.96
CDY42934 Canola cytosol 60.32 58.31
CDY29477 Canola cytosol 40.48 53.31
CDY04598 Canola cytosol 51.85 52.55
CDY01335 Canola cytosol 51.06 52.3
CDY29475 Canola cytosol 51.59 52.28
CDY00362 Canola cytosol 50.79 52.03
CDX96602 Canola cytosol 51.32 51.87
CDY01334 Canola cytosol 50.53 51.76
CDY04600 Canola cytosol 51.32 51.73
CDY04597 Canola cytosol 50.79 51.61
CDX87567 Canola cytosol 50.26 51.35
CDY33669 Canola cytosol 50.79 51.34
CDX88317 Canola cytosol 50.0 51.08
CDY33668 Canola cytosol 50.0 50.81
CDX96604 Canola cytosol 35.19 50.0
CDX85972 Canola cytosol 48.94 50.0
CDY01333 Canola cytosol 49.21 49.6
CDY00364 Canola cytosol 44.44 48.7
CDY18302 Canola cytosol 26.45 48.54
CDY18304 Canola cytosol 26.45 48.54
CDY49745 Canola cytosol 44.44 48.41
CDX68085 Canola cytosol 41.8 48.32
CDY00361 Canola cytosol 48.41 46.21
CDY43052 Canola cytosol 43.39 45.05
CDY55338 Canola cytosol 35.19 44.93
CDY43839 Canola cytosol 43.12 44.78
CDY14328 Canola cytosol 42.86 44.51
CDY18306 Canola cytosol 42.86 44.51
CDY14330 Canola cytosol 42.06 43.92
CDY19037 Canola cytosol 42.06 43.09
CDY19039 Canola cytosol 39.15 42.05
CDY29856 Canola cytosol 40.74 41.96
CDY28789 Canola cytosol 39.95 41.83
CDX92835 Canola cytosol 39.95 41.14
CDX84055 Canola cytosol 38.1 40.45
CDY41780 Canola cytosol 26.98 39.84
CDY44972 Canola cytosol 37.57 39.34
CDY64795 Canola cytosol 36.77 37.98
CDY52173 Canola cytosol 36.24 37.43
VIT_10s0003g04160.t01 Wine grape cytosol 33.6 35.47
CDY64794 Canola cytosol 19.05 34.95
CDY54813 Canola cytosol 33.6 34.89
CDY70033 Canola cytosol 20.63 33.91
CDX95399 Canola cytosol 29.1 30.64
CDX76223 Canola cytosol 21.16 29.85
CDX84061 Canola cytosol 20.63 29.32
CDX76316 Canola cytosol 24.87 28.48
CDX72521 Canola cytosol 24.07 27.83
CDX72522 Canola cytosol 23.55 27.81
CDY17512 Canola cytosol 25.66 27.32
CDY17514 Canola cytosol 24.6 26.65
CDY67664 Canola cytosol 22.49 26.56
CDY52172 Canola cytosol 36.77 26.38
CDY09084 Canola cytosol 23.55 26.18
CDY09082 Canola cytosol 13.49 25.76
CDY51573 Canola cytosol 25.4 24.43
CDY67665 Canola cytosol 17.46 23.57
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078CQT6EnsemblPlants:CDX79210ProteinID:CDX79210
ProteinID:CDX79210.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00131801001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EE9ECFInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg
Description
BnaC06g20930D
Coordinates
chrLK031817:+:328230..329761
Molecular Weight (calculated)
42213.5 Da
IEP (calculated)
5.826
GRAVY (calculated)
-0.015
Length
378 amino acids
Sequence
(BLAST)
001: MADQLQNPLN TSPKPGLIKE EEQEMVALHA ERIVYSLTFP MVFKAALELG VIDTMAAVED GMWLSPSEIA SRLPTKPTNP EAPLMLDRMM RLLTSHSILK
101: CRVVETGEND QTGKIERVYA GEHVCKFFLK DSDGSGSLRS MFMLCHDHVV FKNMSHLKDV ILQGTDACVS AHGMKVFEYI ASDEQFAEKF NPGMSESSTM
201: FMKKFLEKYK GFEDVNTLVD VGGAVGTLLY VVTSKYPHIK GINFDLPPAI AYAPAYAGVE HVVGDMLVEI PKGDAIIMKW ILHAWNDENF VKILKNCWAS
301: LPERGKVIVL DVVMPTEPKC DDLASNLRFT LDMFILTQRS GGRERTLPEL EALGCAAGFS RCQFICRAYS LSLIELRK
Best Arabidopsis Sequence Match ( AT1G63140.2 )
(BLAST)
001: MENHLQHSLT IIPKPDLIKE EQRYHEDTVS LQAERILHAM TFPMVLKTAL ELGVIDMITS VDDGVWLSPS EIALGLPTKP TNPEAPVLLD RMLVLLASHS
101: ILKYRTVETG DNIGSRKTER VYAAEPVCTF FLNRGDGLGS LATLFMVLQG EVCMKPWEHL KDMILEGKDA FTSAHGMRFF ELIGSNEQFA EMFNRAMSEA
201: STLIMKKVLE VYKGFEDVNT LVDVGGGIGT IIGQVTSKYP HIKGINFDLA SVLAHAPFNK GVEHVSGDMF KEIPKGDAIF MKWILHDWTD EDCVKILKNY
301: WKSLPEKGKV IIVEVVTPEE PKINDISSNI VFGMDMLMLA VSSGGKERSL SQFETLASDS GFLRCEIICH AFSYSVIELH K
Arabidopsis Description
O-methyltransferase family protein [Source:TAIR;Acc:AT1G63140]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.