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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67842
CDX71344
CDX71775
CDX89080
CDX95297
CDY07280
CDY52345
CDY56729

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G35160.1 CDX67842 AT3G60820.1 21798944
AT4G35160.1 CDX71344 AT3G60820.1 21798944
AT4G35160.1 CDX71775 AT3G60820.1 21798944
AT4G35160.1 CDX89080 AT3G60820.1 21798944
AT4G35160.1 CDX95297 AT3G60820.1 21798944
AT4G35160.1 CDY07280 AT3G60820.1 21798944
AT4G35160.1 CDY52345 AT3G60820.1 21798944
AT4G35160.1 CDY56729 AT3G60820.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76316 Canola cytosol 78.31 84.24
CDX72521 Canola cytosol 74.37 80.73
CDY67664 Canola cytosol 72.68 80.62
CDY67665 Canola cytosol 63.38 80.36
CDX72522 Canola cytosol 72.11 80.0
AT4G35150.1 Thale cress cytosol 72.96 79.69
CDY17514 Canola cytosol 77.75 79.08
CDY09082 Canola cytosol 43.66 78.28
AT4G35160.1 Thale cress cytosol 81.97 76.18
CDY09084 Canola cytosol 71.83 75.0
CDY51573 Canola cytosol 78.87 71.25
VIT_03s0038g03090.t01 Wine grape cytosol 51.27 51.56
PGSC0003DMT400000736 Potato cytosol 36.06 50.59
VIT_03s0038g03080.t01 Wine grape cytosol 50.42 48.91
PGSC0003DMT400047988 Potato cytosol 48.45 48.18
KRH31595 Soybean cytoskeleton, cytosol, endoplasmic reticulum 48.73 47.27
Solyc01g111900.2.1 Tomato cytosol 47.32 47.06
PGSC0003DMT400047989 Potato cytosol 43.38 45.7
Solyc12g009110.1.1 Tomato cytosol 46.48 44.72
PGSC0003DMT400095923 Potato cytosol 46.48 41.88
CDY18302 Canola cytosol 22.54 38.84
CDY18304 Canola cytosol 22.54 38.84
CDY14330 Canola cytosol 32.39 31.77
CDY19039 Canola cytosol 30.99 31.25
CDY19037 Canola cytosol 32.39 31.17
CDY55338 Canola cytosol 25.35 30.41
CDY29477 Canola cytosol 24.51 30.31
CDY43839 Canola cytosol 30.99 30.22
CDX68055 Canola extracellular 28.73 30.18
CDY70033 Canola cytosol 19.44 30.0
CDY18306 Canola cytosol 30.7 29.95
CDY14328 Canola cytosol 30.7 29.95
CDY43052 Canola cytosol 30.7 29.95
CDX68776 Canola cytosol 24.79 29.73
CDY38336 Canola cytosol 30.7 29.07
CDY29856 Canola cytosol 29.86 28.88
CDX84055 Canola cytosol 28.73 28.65
CDX92835 Canola cytosol 29.58 28.61
CDX68056 Canola cytosol 30.7 28.61
CDX75190 Canola cytosol 27.89 28.37
CDY49883 Canola cytosol 30.14 28.31
CDY45380 Canola cytosol 30.14 28.31
CDY54813 Canola cytosol 29.01 28.3
CDY44537 Canola cytosol 29.86 28.27
CDY44972 Canola cytosol 28.73 28.25
CDY52173 Canola cytosol 29.01 28.14
CDX87513 Canola cytosol 28.45 27.98
CDY64795 Canola cytosol 28.73 27.87
CDX79208 Canola cytosol 29.86 27.82
CDY59571 Canola cytosol 29.86 27.82
CDX96604 Canola cytosol 20.85 27.82
CDX95399 Canola cytosol 27.89 27.58
CDY38339 Canola cytosol 29.58 27.56
CDY29475 Canola cytosol 28.73 27.35
CDX94511 Canola cytosol 29.3 27.3
CDY23305 Canola cytosol 27.89 27.27
CDY04598 Canola cytosol 28.45 27.08
CDY54913 Canola cytosol 29.01 27.03
CDY01334 Canola cytosol 27.89 26.83
CDY00362 Canola cytosol 27.89 26.83
CDX88377 Canola cytosol 28.45 26.72
CDY33668 Canola cytosol 27.89 26.61
CDY28789 Canola cytosol 27.04 26.59
CDX96602 Canola cytosol 27.89 26.47
CDY04597 Canola cytosol 27.61 26.34
CDY01335 Canola cytosol 27.32 26.29
CDY63947 Canola cytosol 28.17 26.25
CDY33669 Canola cytosol 27.61 26.2
CDX88317 Canola cytosol 27.04 25.95
CDX87567 Canola cytosol 27.04 25.95
CDY04600 Canola cytosol 27.32 25.87
CDY42934 Canola cytosol 28.45 25.83
CDX76223 Canola cytosol 19.44 25.75
CDY01900 Canola cytosol 27.89 25.71
CDX68054 Canola cytosol 27.32 25.66
CDX79210 Canola cytosol 27.32 25.66
CDX85972 Canola cytosol 26.48 25.41
CDY01333 Canola cytosol 26.2 24.8
CDY00361 Canola cytosol 27.32 24.49
CDX68085 Canola cytosol 21.69 23.55
CDY49745 Canola cytosol 22.54 23.05
CDY00364 Canola cytosol 22.25 22.9
CDY64794 Canola cytosol 12.68 21.84
CDX84061 Canola cytosol 16.06 21.43
CDY41780 Canola cytosol 14.93 20.7
CDY52172 Canola cytosol 29.3 19.73
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078FXR8UniProt:A0A078FXR8EnsemblPlants:CDY17512
ProteinID:CDY17512ProteinID:CDY17512.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00095708001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF98
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EDF3CAInterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaC03g65510DBnaC03g65510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXR8]
Coordinates
chrLK032074:-:471503..474641
Molecular Weight (calculated)
39398.8 Da
IEP (calculated)
5.599
GRAVY (calculated)
-0.004
Length
355 amino acids
Sequence
(BLAST)
001: MEESKRNLLN EEAKASLDIW RYALGIADIA AAKCAIDLKI PEAIETHPSS QPVTLAELSS TISASPSHLR RIMRFLVHLG VFKEVPTEDG LTTGYTNTPL
101: SRRMLITKRD GKSMAPLILF ETNHEMLAPW LSLSSVVSSP VNGSHPPPFD AVHGKDVWAL TKDNPCFGEM INEAMACDAR RVVPRLAGAC HDLFDGVATV
201: VDVGGGTGEA MGILVKEFPW IKGFNFDLPH VIEVAQVLDG VENVGGDMFD SIPKCDAVFI KWVLHDWGDE DCIKILKNCK ESNIGKVFIV ESIIRDKKKT
301: MMYVRLMLDI AMMAHTTTGK ERTLKEWDFV LNEAGFARYE VRDIDNVHCV IIAYP
Best Arabidopsis Sequence Match ( AT4G35160.1 )
(BLAST)
001: MSSDQLSKFL DRNKMEDNKR KVLDEEAKAS LDIWKYVFGF ADIAAAKCAI DLKIPEAIEN HPSSQPVTLA ELSSAVSASP SHLRRIMRFL VHQGIFKEIP
101: TKDGLATGYV NTPLSRRLMI TRRDGKSLAP FVLFETTPEM LAPWLRLSSV VSSPVNGSTP PPFDAVHGKD VWSFAQDNPF LSDMINEAMA CDARRVVPRV
201: AGACHGLFDG VTTMVDVGGG TGETMGMLVK EFPWIKGFNF DLPHVIEVAE VLDGVENVEG DMFDSIPACD AIFIKWVLHD WGDKDCIKIL KNCKEAVPPN
301: IGKVLIVESV IGENKKTMIV DERDEKLEHV RLMLDMVMMA HTSTGKERTL KEWDFVLKEA GFARYEVRDI DDVQSLIIAY RS
Arabidopsis Description
ASMTAcetylserotonin O-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9T003]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.