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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035481.1-P Field mustard cytosol 97.47 97.47
CDY44972 Canola cytosol 96.35 95.01
AT1G33030.1 Thale cress cytosol 81.74 82.67
VIT_02s0025g02920.t01 Wine grape cytosol 52.81 51.79
CDY43839 Canola cytosol 47.19 46.15
CDY14328 Canola cytosol 46.91 45.88
CDY18306 Canola cytosol 46.91 45.88
CDY43052 Canola cytosol 46.91 45.88
CDY55338 Canola cytosol 37.92 45.61
CDY14330 Canola cytosol 45.79 45.03
CDY18302 Canola cytosol 25.84 44.66
CDY18304 Canola cytosol 25.84 44.66
CDY29856 Canola cytosol 45.79 44.41
CDX92835 Canola cytosol 45.79 44.41
CDY19037 Canola cytosol 45.22 43.63
CDY19039 Canola cytosol 42.98 43.47
CDY28789 Canola cytosol 42.42 41.83
CDY29477 Canola cytosol 33.43 41.46
CDX87513 Canola cytosol 41.85 41.27
CDX68055 Canola extracellular 38.76 40.83
CDX88377 Canola cytosol 42.98 40.48
CDX68056 Canola cytosol 43.26 40.42
CDY41780 Canola cytosol 28.93 40.23
CDY54913 Canola cytosol 42.7 39.9
CDY38336 Canola cytosol 41.57 39.47
CDX79208 Canola cytosol 41.85 39.11
CDY04598 Canola cytosol 40.73 38.87
CDX68054 Canola cytosol 41.01 38.62
CDY29475 Canola cytosol 40.45 38.61
CDY01335 Canola cytosol 39.89 38.48
CDY00362 Canola cytosol 39.89 38.48
CDY44537 Canola cytosol 40.45 38.4
CDY45380 Canola cytosol 40.73 38.36
CDY63947 Canola cytosol 41.01 38.32
CDY38339 Canola cytosol 41.01 38.32
CDY01334 Canola cytosol 39.61 38.21
CDX87567 Canola cytosol 39.61 38.11
CDX88317 Canola cytosol 39.61 38.11
CDX79210 Canola cytosol 40.45 38.1
CDY59571 Canola cytosol 40.73 38.06
CDX96604 Canola cytosol 28.37 37.97
CDY04597 Canola cytosol 39.61 37.9
CDY04600 Canola cytosol 39.89 37.87
CDX68776 Canola cytosol 31.46 37.84
CDY49883 Canola cytosol 40.17 37.83
CDX96602 Canola cytosol 39.61 37.7
CDY33669 Canola cytosol 39.33 37.43
CDY33668 Canola cytosol 39.04 37.37
CDX85972 Canola cytosol 38.48 37.03
CDY23305 Canola cytosol 37.64 36.91
CDX94511 Canola cytosol 39.33 36.75
CDX75190 Canola cytosol 35.96 36.68
CDY42934 Canola cytosol 40.17 36.57
CDY01333 Canola cytosol 38.2 36.27
CDY70033 Canola cytosol 23.31 36.09
CDX68085 Canola cytosol 33.15 36.09
CDY49745 Canola cytosol 34.83 35.73
CDY00364 Canola cytosol 34.55 35.65
CDY00361 Canola cytosol 38.48 34.6
CDY01900 Canola cytosol 37.08 34.29
CDY64795 Canola cytosol 35.11 34.15
CDY52173 Canola cytosol 34.55 33.61
CDY54813 Canola cytosol 33.99 33.24
CDX95399 Canola cytosol 32.3 32.03
CDX76223 Canola cytosol 23.31 30.97
CDY09082 Canola cytosol 16.85 30.3
CDY64794 Canola cytosol 17.13 29.61
CDX76316 Canola cytosol 27.25 29.39
CDY17512 Canola cytosol 28.65 28.73
CDY09084 Canola cytosol 27.25 28.53
CDY17514 Canola cytosol 27.53 28.08
CDX72521 Canola cytosol 25.56 27.83
CDX72522 Canola cytosol 24.44 27.19
CDY51573 Canola cytosol 28.93 26.21
CDX84061 Canola cytosol 19.38 25.94
CDY67664 Canola cytosol 23.31 25.94
CDY67665 Canola cytosol 20.22 25.71
CDY52172 Canola cytosol 35.11 23.72
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078D4J5EnsemblPlants:CDX84055ProteinID:CDX84055
ProteinID:CDX84055.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00139917001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF81InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EE1F5EInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg
Description
BnaC08g07320D
Coordinates
chrLK031835:+:399470..400872
Molecular Weight (calculated)
39291.5 Da
IEP (calculated)
5.924
GRAVY (calculated)
0.016
Length
356 amino acids
Sequence
(BLAST)
001: MEEENLSLYA MILSSSSVLP MILKTAIDLG LFDILSESGP SSPLSASQIM SLLSTQTQKQ HDSTLLNRIL RCLASYSILT CSVSTDQGEP REVYRLAPVA
101: KYFTKNRDGG GSLAPLVNLF QDKVVTDIWY DLKDCVLEGG LPFNKAHGAS AAELVGRDSR FREVFQSSMK GFNEVFMEEV VNKYKGYDGV NSLVDVGGGD
201: GSILRKIISK HPHILKAINF DLSSVIKNTS SASPGIENVA GDMFTSIPKG EAIFMKWMLH SWDDEHCVKI LSNCYQSLPS TGKVIVIDMV IPDFPGGTLL
301: DRSLFQFEMF MMSMNPSGKE RTKKEFEVLA RLAGFSSVQV PFTSLCFSVV EFHKTL
Best Arabidopsis Sequence Match ( AT1G33030.1 )
(BLAST)
001: MEEQNLSSYA MILSSSSVLP MVLKTAIDLG LFDILAESGP SSASQIFSLL SNETKKHHDS SLVNRILRFL ASYSILTCSV STEHGEPFAI YGLAPVAKYF
101: TKNQNGGGSL APMVNLFQDK VVTDMWYNLK DSVLEGGLPF NNTHGSSAVE LVGSDSRFRE VFQSSMKGFN EVFIEEFLKN YNGFDGVKSL VDVGGGDGSL
201: LSRIISKHTH IIKAINFDLP TVINTSLPSP GIEHVAGDMF TNTPKGEAIF MKWMLHSWDD DHCVKILSNC YQSLPSNGKV IVVDMVIPEF PGDTLLDRSL
301: FQFELFMMNM NPSGKERTKK EFEILARLAG FSNVQVPFTS LCFSVLEFHK NK
Arabidopsis Description
At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.