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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68085 Canola cytosol 84.86 96.02
CDX88317 Canola cytosol 92.7 92.7
CDX87567 Canola cytosol 92.43 92.43
AT1G76790.1 Thale cress cytosol 81.08 81.74
CDX96604 Canola cytosol 54.32 75.56
CDY29477 Canola cytosol 58.38 75.26
CDY01334 Canola cytosol 74.86 75.07
CDY00362 Canola cytosol 74.32 74.53
CDY01335 Canola cytosol 72.97 73.17
CDY33668 Canola cytosol 72.97 72.58
CDX96602 Canola cytosol 73.24 72.46
CDY04598 Canola cytosol 72.7 72.12
CDY29475 Canola cytosol 72.7 72.12
CDY04600 Canola cytosol 72.43 71.47
CDY33669 Canola cytosol 72.16 71.39
CDY04597 Canola cytosol 71.62 71.24
CDY01333 Canola cytosol 70.0 69.07
CDY00364 Canola cytosol 62.97 67.54
CDY49745 Canola cytosol 63.24 67.44
CDY00361 Canola cytosol 66.22 61.87
CDX68776 Canola cytosol 44.05 55.07
CDX68056 Canola cytosol 55.68 54.07
CDY38339 Canola cytosol 54.59 53.02
CDY59571 Canola cytosol 54.59 53.02
CDY38336 Canola cytosol 53.51 52.8
CDY44537 Canola cytosol 53.24 52.53
CDX79208 Canola cytosol 53.78 52.23
CDY63947 Canola cytosol 53.78 52.23
CDY18304 Canola cytosol 28.92 51.94
CDY18302 Canola cytosol 28.92 51.94
CDX68055 Canola extracellular 47.3 51.78
CDY54913 Canola cytosol 53.24 51.71
CDX75190 Canola cytosol 47.84 50.72
CDY23305 Canola cytosol 49.73 50.69
CDY45380 Canola cytosol 51.08 50.0
CDX68054 Canola cytosol 50.81 49.74
CDY49883 Canola cytosol 50.54 49.47
CDX94511 Canola cytosol 50.81 49.34
CDX79210 Canola cytosol 50.0 48.94
CDX88377 Canola cytosol 50.0 48.94
CDY01900 Canola cytosol 50.81 48.83
CDX87513 Canola cytosol 47.3 48.48
CDY42934 Canola cytosol 50.54 47.83
CDY14330 Canola cytosol 44.59 45.58
CDY18306 Canola cytosol 42.43 43.13
CDY29856 Canola cytosol 42.7 43.05
CDY55338 Canola cytosol 34.32 42.91
CDY43839 Canola cytosol 42.16 42.86
CDY14328 Canola cytosol 42.16 42.86
CDY43052 Canola cytosol 41.89 42.58
CDX92835 Canola cytosol 42.16 42.51
CDY19037 Canola cytosol 40.81 40.92
CDY28789 Canola cytosol 39.46 40.44
CDY19039 Canola cytosol 38.11 40.06
VIT_10s0003g04160.t01 Wine grape cytosol 37.57 38.83
CDX84055 Canola cytosol 37.03 38.48
CDY44972 Canola cytosol 36.49 37.4
CDY64795 Canola cytosol 34.86 35.25
CDY52173 Canola cytosol 34.86 35.25
CDY41780 Canola cytosol 24.32 35.16
CDY70033 Canola cytosol 21.62 34.78
CDY54813 Canola cytosol 33.78 34.34
CDY64794 Canola cytosol 18.11 32.52
CDX95399 Canola cytosol 30.54 31.48
CDX76223 Canola cytosol 22.16 30.6
CDY09084 Canola cytosol 26.22 28.53
CDY09082 Canola cytosol 15.14 28.28
CDX84061 Canola cytosol 20.27 28.2
CDX72522 Canola cytosol 24.05 27.81
CDX76316 Canola cytosol 24.05 26.97
CDX72521 Canola cytosol 23.78 26.91
CDY17512 Canola cytosol 25.41 26.48
CDY67664 Canola cytosol 22.7 26.25
CDY51573 Canola cytosol 27.57 25.95
CDY17514 Canola cytosol 24.32 25.79
CDY52172 Canola cytosol 35.14 24.67
CDY67665 Canola cytosol 17.84 23.57
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1ProteinID:AGQ89438.1EnsemblPlants:CDX85972ProteinID:CDX85972
ProteinID:CDX85972.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259GO:GO:0046983
EnsemblPlantsGene:GSBRNA2T00143831001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891
PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisation
GO:S5J1C7UniProt:S5J1C7InterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI00035A9954
InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg:::
Description
BnaC06g21620DBnaC06g21620D protein [Source:UniProtKB/TrEMBL;Acc:S5J1C7]
Coordinates
chrLK031843:-:1243324..1245220
Molecular Weight (calculated)
40975.3 Da
IEP (calculated)
4.563
GRAVY (calculated)
-0.002
Length
370 amino acids
Sequence
(BLAST)
001: MGYVSDPKSM NEINGDDETE LGLRAVRLAN YITFPMVFKA AIELGVIDTL YSAARADMNG SSSFLKPSEI ATRLPTTPSN PEAPALLDRM LRLLASYSMV
101: KCQILDGERV YKAEPICKYF LRYNIEEIGT LASQFILELD SVFLNTWAQL KDVVLEGGDA FARANGGLKL FDYMGTDERL SKLFNRTGFS VGVLQKFLEV
201: YKGFEGVNVL VDVGGGVGNT LGFVTSKYPN IKGINFDLTC ALTQAPSYPN VEHVAGDMFV EVPRGDAIIL KRMLHDWSDE DCAKILKNCW KALPENGKVI
301: IMELVIPDEA ESADVQSNIA FDMDLLMLTQ CSGGKERSRA EYEAMAADSG FANCKFVCQA YHLWVIEFTK
Best Arabidopsis Sequence Match ( AT1G76790.1 )
(BLAST)
001: MGHLIPQTGD EETELGLAAV RLANCAAFPM VFKAAIELGV IDTLYLAARD DVTGSSSFLT PSEIAIRLPT KPSNPEAPAL LDRILRLLAS YSMVKCQIID
101: GNRVYKAEPI CRYFLKDNVD EELGTLASQL IVTLDTVFLN TWGELKNVVL EGGVAFGRAN GGLKLFDYIS KDERLSKLFN RTGFSVAVLK KILQVYSGFE
201: GVNVLVDVGG GVGDTLGFVT SKYPNIKGIN FDLTCALTQA PSYPNVEHVA GDMFVDVPKG DAILLKRILH DWTDEDCEKI LKNCWKALPE NGKVIVMEVV
301: TPDEADNRDV ISNIAFDMDL LMLTQLSGGK ERSRAEYVAM AANSGFPRCN FVCSAYHLWV IELTKQA
Arabidopsis Description
IGMT5Indole glucosinolate O-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRD4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.