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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87513 Canola cytosol 89.15 93.35
CDX68055 Canola extracellular 65.08 72.78
CDX68054 Canola cytosol 71.96 71.96
CDX79210 Canola cytosol 70.37 70.37
CDY23305 Canola cytosol 61.9 64.46
CDY49883 Canola cytosol 64.29 64.29
CDX68776 Canola cytosol 50.26 64.19
CDY45380 Canola cytosol 63.76 63.76
CDY38336 Canola cytosol 63.23 63.73
CDX68056 Canola cytosol 64.02 63.52
CDY59571 Canola cytosol 64.02 63.52
CDY44537 Canola cytosol 62.96 63.47
CDY38339 Canola cytosol 63.76 63.25
CDY63947 Canola cytosol 63.23 62.73
CDY54913 Canola cytosol 61.9 61.42
CDX75190 Canola cytosol 56.61 61.32
CDX79208 Canola cytosol 61.64 61.15
CDX94511 Canola cytosol 60.05 59.58
CDY01900 Canola cytosol 59.79 58.7
CDY42934 Canola cytosol 60.58 58.57
CDY18304 Canola cytosol 28.57 52.43
CDY18302 Canola cytosol 28.57 52.43
CDX96602 Canola cytosol 50.53 51.07
CDY29477 Canola cytosol 38.62 50.87
CDY33668 Canola cytosol 50.0 50.81
CDY00362 Canola cytosol 49.21 50.41
CDY01334 Canola cytosol 49.21 50.41
CDY01335 Canola cytosol 49.21 50.41
CDY33669 Canola cytosol 49.74 50.27
CDY29475 Canola cytosol 49.47 50.13
CDX85972 Canola cytosol 48.94 50.0
CDY04598 Canola cytosol 49.21 49.87
CDX87567 Canola cytosol 48.68 49.73
CDY04600 Canola cytosol 49.21 49.6
CDY04597 Canola cytosol 48.68 49.46
CDX88317 Canola cytosol 48.41 49.46
CDX96604 Canola cytosol 34.66 49.25
CDY01333 Canola cytosol 46.83 47.2
CDX68085 Canola cytosol 40.74 47.09
CDY00364 Canola cytosol 42.33 46.38
CDY43052 Canola cytosol 44.44 46.15
CDY14330 Canola cytosol 44.18 46.13
CDY43839 Canola cytosol 44.18 45.88
CDY49745 Canola cytosol 41.8 45.53
CDY00361 Canola cytosol 47.62 45.45
CDY14328 Canola cytosol 43.65 45.33
CDY18306 Canola cytosol 43.65 45.33
CDY55338 Canola cytosol 35.45 45.27
CDY19037 Canola cytosol 42.59 43.63
CDX84055 Canola cytosol 40.48 42.98
CDY29856 Canola cytosol 41.53 42.78
CDY28789 Canola cytosol 40.74 42.66
CDY19039 Canola cytosol 39.68 42.61
CDX92835 Canola cytosol 41.27 42.51
CDY44972 Canola cytosol 39.68 41.55
CDY41780 Canola cytosol 27.51 40.62
CDY70033 Canola cytosol 22.49 36.96
VIT_10s0003g04160.t01 Wine grape cytosol 34.92 36.87
CDY64795 Canola cytosol 35.45 36.61
CDY52173 Canola cytosol 34.92 36.07
CDY54813 Canola cytosol 33.07 34.34
CDY64794 Canola cytosol 18.52 33.98
CDX95399 Canola cytosol 31.22 32.87
CDX76223 Canola cytosol 23.02 32.46
CDX84061 Canola cytosol 22.22 31.58
CDX72521 Canola cytosol 25.13 29.05
CDX76316 Canola cytosol 24.87 28.48
CDY17512 Canola cytosol 26.72 28.45
CDX72522 Canola cytosol 23.55 27.81
CDY09084 Canola cytosol 24.6 27.35
CDY17514 Canola cytosol 24.87 26.93
CDY67664 Canola cytosol 22.49 26.56
CDY67665 Canola cytosol 19.05 25.71
CDY52172 Canola cytosol 35.45 25.43
CDY09082 Canola cytosol 13.23 25.25
CDY51573 Canola cytosol 26.19 25.19
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078DHC6EnsemblPlants:CDX88377ProteinID:CDX88377
ProteinID:CDX88377.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00147902001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EBAA3DInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg
Description
BnaC06g38210D
Coordinates
chrLK031855:+:635960..637675
Molecular Weight (calculated)
41766.9 Da
IEP (calculated)
5.158
GRAVY (calculated)
0.024
Length
378 amino acids
Sequence
(BLAST)
001: MANQLQKPLT NSPKPGLTKE EDSQEMVALQ AQRMVYSLTL PMVFKAALEV GVIDTLATVE DSMWLSPSEI ASRLPTKPTN PEAPMLLDRM LRLLASDSVL
101: KCRVLETGEN GGTGKTDRVY AAEPVCKLFL KDRDGSGSLF SFFMLCQNHV IFKALSHLKD VILEGKDAFM SAHGMRAFEY LGSDEQFAEM FNLAMSESST
201: LVMKKILEVY KGFEDVDTLV DVGGGVGTVL ALVTSKYPRI KGINFDLASV IANAPPCPGV QHVAGDMLAE VPKGDDIFMK WVFHAWDDES CIKILKNCWL
301: SLPEKGKVIV VEMVMPKEPK SCDCSPNIGY TVDMFMLSLR GSGGERTLSQ YEALAYASGF RCELICRSFS FSLMEFHK
Best Arabidopsis Sequence Match ( AT1G63140.2 )
(BLAST)
001: MENHLQHSLT IIPKPDLIKE EQRYHEDTVS LQAERILHAM TFPMVLKTAL ELGVIDMITS VDDGVWLSPS EIALGLPTKP TNPEAPVLLD RMLVLLASHS
101: ILKYRTVETG DNIGSRKTER VYAAEPVCTF FLNRGDGLGS LATLFMVLQG EVCMKPWEHL KDMILEGKDA FTSAHGMRFF ELIGSNEQFA EMFNRAMSEA
201: STLIMKKVLE VYKGFEDVNT LVDVGGGIGT IIGQVTSKYP HIKGINFDLA SVLAHAPFNK GVEHVSGDMF KEIPKGDAIF MKWILHDWTD EDCVKILKNY
301: WKSLPEKGKV IIVEVVTPEE PKINDISSNI VFGMDMLMLA VSSGGKERSL SQFETLASDS GFLRCEIICH AFSYSVIELH K
Arabidopsis Description
O-methyltransferase family protein [Source:TAIR;Acc:AT1G63140]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.