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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70151
CDX98843
CDY04950
CDY52149

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G21130.1 CDX70151 AT5G05410.1 18552202
AT1G21130.1 CDX98843 AT5G05410.1 18552202
AT1G21130.1 CDY04950 AT5G05410.1 18552202
AT1G21130.1 CDY52149 AT5G05410.1 18552202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012269.1-P Field mustard cytosol 100.0 100.0
CDY00362 Canola cytosol 98.37 98.37
CDY29477 Canola cytosol 72.63 93.38
CDY01335 Canola cytosol 92.41 92.41
CDX96604 Canola cytosol 65.58 90.98
AT1G21130.1 Thale cress cytosol 91.6 90.62
CDY33668 Canola cytosol 91.33 90.59
CDY04597 Canola cytosol 91.06 90.32
CDY04598 Canola cytosol 91.06 90.08
CDY29475 Canola cytosol 90.79 89.81
AT1G21110.1 Thale cress cytosol 89.97 89.01
CDY04600 Canola cytosol 90.24 88.8
CDX96602 Canola cytosol 89.97 88.77
CDY33669 Canola cytosol 89.7 88.5
CDY01333 Canola cytosol 87.26 85.87
CDY49745 Canola cytosol 80.22 85.3
CDY00364 Canola cytosol 79.67 85.22
CDY00361 Canola cytosol 88.08 82.07
AT1G21120.2 Thale cress cytosol 92.14 80.76
CDX85972 Canola cytosol 75.07 74.86
CDX88317 Canola cytosol 72.9 72.7
CDX87567 Canola cytosol 72.63 72.43
CDX68085 Canola cytosol 63.69 71.87
CDX68776 Canola cytosol 46.34 57.77
CDX68056 Canola cytosol 58.54 56.69
CDX79208 Canola cytosol 57.45 55.64
CDY54913 Canola cytosol 56.91 55.12
CDY38336 Canola cytosol 55.28 54.4
CDY59571 Canola cytosol 55.83 54.07
CDY38339 Canola cytosol 55.83 54.07
CDY44537 Canola cytosol 54.74 53.87
CDY63947 Canola cytosol 55.56 53.81
CDY23305 Canola cytosol 52.85 53.72
CDX68055 Canola extracellular 48.78 53.25
CDY45380 Canola cytosol 54.2 52.91
CDX75190 Canola cytosol 49.59 52.44
CDY49883 Canola cytosol 53.39 52.12
CDX94511 Canola cytosol 53.39 51.71
CDX68054 Canola cytosol 52.57 51.32
CDY01900 Canola cytosol 53.12 50.91
CDX79210 Canola cytosol 51.76 50.53
CDY18302 Canola cytosol 28.18 50.49
CDY18304 Canola cytosol 28.18 50.49
CDY42934 Canola cytosol 52.85 49.87
CDX88377 Canola cytosol 50.41 49.21
CDX87513 Canola cytosol 47.97 49.03
CDY18306 Canola cytosol 44.44 45.05
CDY14330 Canola cytosol 44.17 45.03
CDY14328 Canola cytosol 43.9 44.51
CDY29856 Canola cytosol 44.17 44.41
CDY43839 Canola cytosol 43.63 44.23
CDY43052 Canola cytosol 43.36 43.96
CDX92835 Canola cytosol 43.63 43.87
CDY55338 Canola cytosol 34.42 42.91
CDY28789 Canola cytosol 40.92 41.83
CDY19037 Canola cytosol 40.65 40.65
CDX84055 Canola cytosol 38.21 39.61
CDY19039 Canola cytosol 37.4 39.2
CDY44972 Canola cytosol 37.94 38.78
CDY41780 Canola cytosol 26.56 38.28
VIT_10s0003g04160.t01 Wine grape cytosol 36.86 37.99
CDY52173 Canola cytosol 36.04 36.34
CDY64795 Canola cytosol 35.5 35.79
CDY54813 Canola cytosol 35.23 35.71
CDY70033 Canola cytosol 21.68 34.78
CDY64794 Canola cytosol 18.7 33.5
CDX84061 Canola cytosol 22.22 30.83
CDX95399 Canola cytosol 29.81 30.64
CDX76223 Canola cytosol 21.95 30.22
CDY09084 Canola cytosol 27.1 29.41
CDX76316 Canola cytosol 26.02 29.09
CDY09082 Canola cytosol 15.45 28.79
CDX72521 Canola cytosol 25.2 28.44
CDX72522 Canola cytosol 24.66 28.44
CDY17512 Canola cytosol 26.83 27.89
CDY17514 Canola cytosol 26.29 27.79
CDY67664 Canola cytosol 23.31 26.88
CDY51573 Canola cytosol 28.18 26.46
CDY67665 Canola cytosol 19.78 26.07
CDY52172 Canola cytosol 36.31 25.43
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078EKR5EnsemblPlants:CDY01334ProteinID:CDY01334
ProteinID:CDY01334.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00112297001
InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100
PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTases
SUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0001B63E16InterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sfSEG:seg
Description
BnaA07g11070D
Coordinates
chrLK031926:+:355618..357134
Molecular Weight (calculated)
40334.6 Da
IEP (calculated)
4.733
GRAVY (calculated)
0.116
Length
369 amino acids
Sequence
(BLAST)
001: MGILFEETLS SNPTIQIATD DDNELGLMAV RIANAAAFPM VLKAALELGV FDTLYAASVF LSPSEIATRL PTAPRNPEAP ALLDRMLRLL ASYSMVKCGT
101: DQAGKGERVY RAEPICRFFL KDNIQDIGSL ASQVIVNFHS VFLNTWAQLK DVVLEGGDAF GRAHGGMKLF DYMGTDERFS KLFNQTGFTI AVVKKALEVY
201: QGFNGVNVLV DVGGGVGNTL GVVTSKYPNI KGINFDLTCA LAQAPSYPGV EHVAGDMFVD VPTGDAMILK RILHDWTDED CVKILKNCWK SLPENGKVVV
301: IELVTPDSAE SGDINSNIAF DMDMLMFTQC SGGKERSRAE FEALAAESCF THCKFVCQAY HCWVIEFCK
Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Arabidopsis Description
IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.