Factsheet for AT1G21110.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G21130.1	Thale cress	cytosol	94.91	94.91
AT1G21100.1	Thale cress	cytosol	94.91	94.91
CDY00362	Canola	cytosol	89.28	90.24
Bra012269.1-P	Field mustard	cytosol	89.01	89.97
CDY01334	Canola	cytosol	89.01	89.97
AT1G21120.2	Thale cress	cytosol	97.86	86.7
AT1G76790.1	Thale cress	cytosol	69.97	71.12
AT1G62900.1	Thale cress	cytosol	31.1	56.59
AT5G53810.1	Thale cress	cytosol	55.76	55.03
AT1G77530.1	Thale cress	cytosol	55.23	54.07
AT1G77520.1	Thale cress	cytosol	54.96	53.81
AT5G37170.1	Thale cress	cytosol	44.5	49.7
AT1G63140.4	Thale cress	cytosol	52.28	48.63
AT5G54160.1	Thale cress	cytosol	44.5	45.73
AT1G33030.1	Thale cress	cytosol	37.0	39.2
AT1G51990.1	Thale cress	cytosol	37.27	38.29
VIT_10s0003g04160.t01	Wine grape	cytosol	35.92	37.43
AT3G53140.1	Thale cress	cytosol	30.03	31.2
AT4G35150.1	Thale cress	cytosol	25.47	29.23
AT4G35160.1	Thale cress	cytosol	27.08	26.44

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	EntrezGene:838707	ProteinID:AAF80650.1	ProteinID:AEE30065.1
EMBL:AK118791	ArrayExpress:AT1G21110	EnsemblPlantsGene:AT1G21110	RefSeq:AT1G21110	TAIR:AT1G21110	RefSeq:AT1G21110-TAIR-G
EnsemblPlants:AT1G21110.1	TAIR:AT1G21110.1	Unigene:At.24626	EMBL:BT005546	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171
GO:GO:0008757	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019438	GO:GO:0032259
GO:GO:0046983	InterPro:IPR016461	InterPro:IPR036388	RefSeq:NP_173535.1	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2
PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PO:PO:0000293	PFscan:PS51683	PANTHER:PTHR11746
PANTHER:PTHR11746:SF118	InterPro:Plant_MeTrfase_dimerisation	UniProt:Q9LPU6	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335
UniParc:UPI000000C69E	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:

Description

IGMT3Indole glucosinolate O-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU6]

Coordinates

chr1:-:7389981..7391603

Molecular Weight (calculated)

40937.4 Da

IEP (calculated)

4.991

GRAVY (calculated)

0.064

Length

373 amino acids

Sequence
(BLAST)

001: MGYLFEETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKASLELGV FDTLYAEASR TDSFLSPSEI ASKLPTTPRN PGAPVLLDRM LRLLASYSMV
101: KCEKVSVGKE QRVYRAEPIC RFFLKNNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYQGFKGV NVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPT YPGVEHVAGD MFVDVPTGNA MILKRILHDW TDEDCVKILK NCWKSLPQNG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFSHCQFV CQAYHCWIIE FCK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.